AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
August 09, 2013 11:39AM
> unequal spacing of TENT functions would be invaluable for block designs since
> the onset period is of course much more important than the boring plateau phase....
> do you think this is on the todo list for afni?

You're the first person who has asked for such an option. If more people want this, we may consider it.

> I am trying your suggestion of splitting it up into separate trial types, do you think
> it is possible to concatenate the -iresp outputs?

You can use 3dTcat to glue the two outputs together. However, since the second response curve has a different time resolution, you would have to keep this in mind or artificially fill up the bigger gap before you view the final response curve.

> also great would be an option to force TENT to zero only on the onset (like the SIN
> model does, but there it cannot be turned off).

There are two ways to force the response to 0 at the onset: use TENTzero(0, c, n), or use TENT(b,c,n) but set 'b' to your time grid (for example, TR value). You can also manipulate the 'c' value in TENTzero or TENT so that the response curve ends at the time point you want. Also the tent function does go back to zero because it has to be anchored on the ground. In other words, when you set the last TENT at 'c', the response would presumably go back to zero at the next time point after 'c'.

Gang



Edited 1 time(s). Last edit at 08/09/2013 11:49AM by Gang.
Subject Author Posted

Question about TENT/SPLIN - number of parameters

paranoidandroid August 05, 2013 10:10AM

Re: Question about TENT/SPLIN - number of parameters

gang August 05, 2013 10:59AM

Re: Question about TENT/SPLIN - number of parameters

paranoidandroid August 09, 2013 08:03AM

Re: Question about TENT/SPLIN - number of parameters

gang August 09, 2013 11:39AM

Re: Question about TENT/SPLIN - number of parameters

Daniel Glen August 05, 2013 04:26PM

Re: Question about TENT/SPLIN - number of parameters

paranoidandroid August 06, 2013 01:08PM

Re: Question about TENT/SPLIN - number of parameters

gang August 06, 2013 06:48PM

Re: Question about TENT/SPLIN - multicollieanarity among TENT/SPLIN of the same condition

Erik Chang August 31, 2013 06:28AM

Re: Question about TENT/SPLIN - multicollieanarity among TENT/SPLIN of the same condition

rick reynolds August 31, 2013 11:32AM