AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 19, 2014 10:53AM
Hi Daniel,
We're really only using it for coregistration of epi to T1, but it had been the best option we've been able to find.

align_epi_anat.py -epi ${func} -anat ${sfile} -anat2epi -anat_has_skull no -volreg off -tshift off -deoblique off -suffix _2epi -epi_base 0 -giant_move

Thanks for any help!
Michael
Subject Author Posted

nifti compatibility align_epi_anat.py 1.44?

jasmins March 14, 2014 12:58PM

Re: nifti compatibility align_epi_anat.py 1.44?

rick reynolds March 14, 2014 04:06PM

Re: nifti compatibility align_epi_anat.py 1.44?

Michael Gregory March 14, 2014 04:48PM

Re: nifti compatibility align_epi_anat.py 1.44?

rick reynolds March 14, 2014 09:22PM

Re: nifti compatibility align_epi_anat.py 1.44?

Daniel Glen March 18, 2014 04:28PM

Re: nifti compatibility align_epi_anat.py 1.44?

Michael Gregory March 19, 2014 10:53AM

Re: nifti compatibility align_epi_anat.py 1.44?

Daniel Glen May 02, 2014 05:55PM

Re: nifti compatibility align_epi_anat.py 1.44?

Isaac Schwabacher September 30, 2014 03:50PM

Re: nifti compatibility align_epi_anat.py 1.44?

Daniel Glen October 01, 2014 07:57AM

Re: nifti compatibility align_epi_anat.py 1.44?

Isaac Schwabacher October 01, 2014 11:39AM