Hi Dane,
This is not a 3dDeconvolve command, so keep in mind
the options will not look the same. It is a good idea
to go based on the examples in the help.
In this case, the stim_files and motion_file options
are not being given correctly. There is no 1, 2 or
1..8 enumeration like in 3dDeconvolve. Consider:
-regress_stim_files $stimdir/${subj}_Strong_stim4b.1D \
$stimdir/${subj}_Weak_stim4b.1D \
-regress_stim_labels Strg Weak \
-regress_motion_file /Volumes/Motion_Pre-moco/${subj}_${sess}+orig_vr_motion.1D
...
- rick