AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
July 10, 2014 01:35PM
Hi Dane,

This is not a 3dDeconvolve command, so keep in mind
the options will not look the same. It is a good idea
to go based on the examples in the help.

In this case, the stim_files and motion_file options
are not being given correctly. There is no 1, 2 or
1..8 enumeration like in 3dDeconvolve. Consider:

-regress_stim_files $stimdir/${subj}_Strong_stim4b.1D \
                    $stimdir/${subj}_Weak_stim4b.1D   \
-regress_stim_labels Strg Weak                        \
-regress_motion_file /Volumes/Motion_Pre-moco/${subj}_${sess}+orig_vr_motion.1D
...

- rick
Subject Author Posted

Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders June 30, 2014 12:59AM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

rick reynolds June 30, 2014 10:18AM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders June 30, 2014 07:55PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

rick reynolds July 01, 2014 09:11AM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders July 05, 2014 09:00PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

rick reynolds July 09, 2014 10:17AM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders July 09, 2014 07:57PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

rick reynolds July 09, 2014 09:10PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders July 09, 2014 10:21PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

rick reynolds July 10, 2014 01:35PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders July 10, 2014 10:22PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

rick reynolds July 11, 2014 09:15AM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders July 11, 2014 10:27PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders July 12, 2014 11:11PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

rick reynolds July 13, 2014 02:32PM

Re: Bandpass + 3dDeconvolve for tasked-based FC analysis

d6anders July 08, 2014 03:56PM