AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
July 23, 2014 02:05PM
No error message I could find, any idea why (see below)?

3dDeconvolve -input pb04.subj12.r01.scale+tlrc.HEAD pb04.subj12.r02.scale+tlrc.HEAD pb04.subj12.r03.scale+tlrc.HEAD pb04.subj12.r04.scale+tlrc.HEAD pb04.subj12.r05.scale+tlrc.HEAD pb04.subj12.r06.scale+tlrc.HEAD -censor motion_subj12_censor.1D -polort 3 -num_stimts 10 -stim_times 1 stimuli/ae12.1D GAM -stim_label 1 ae12 -stim_times 2 stimuli/as12.1D GAM -stim_label 2 as12 -stim_times 3 stimuli/pe12.1D GAM -stim_label 3 pe12 -stim_times 4 stimuli/ps12.1D GAM -stim_label 4 ps12 -stim_file 5 motion_demean.1D[0] -stim_base 5 -stim_label 5 roll -stim_file 6 motion_demean.1D[1] -stim_base 6 -stim_label 6 pitch -stim_file 7 motion_demean.1D[2] -stim_base 7 -stim_label 7 yaw -stim_file 8 motion_demean.1D[3] -stim_base 8 -stim_label 8 dS -stim_file 9 motion_demean.1D[4] -stim_base 9 -stim_label 9 dL -stim_file 10 motion_demean.1D[5] -stim_base 10 -stim_label 10 dP -fout -tout -x1D X.xmat.1D -xjpeg X.jpg -x1D_uncensored X.nocensor.xmat.1D -fitts fitts.subj12 -errts errts.subj12 -bucket stats.subj12
++ 3dDeconvolve: AFNI version=AFNI_2011_12_21_1014 (May 16 2014) [64-bit]
++ Authored by: B. Douglas Ward, et al.
++ current memory malloc-ated = 319,350 bytes (about 319 thousand [kilo])
++ loading dataset pb04.subj12.r01.scale+tlrc.HEAD pb04.subj12.r02.scale+tlrc.HEAD pb04.subj12.r03.scale+tlrc.HEAD pb04.subj12.r04.scale+tlrc.HEAD pb04.subj12.r05.scale+tlrc.HEAD pb04.subj12.r06.scale+tlrc.HEAD
++ current memory malloc-ated = 3,591,116,796 bytes (about 3.6 billion [giga])
++ Auto-catenated input datasets treated as multiple imaging runs
++ Auto-catenated datasets start at: 0 218 436 654 872 1090
++ STAT automask has 878741 voxels (out of 1372489 = 64.0%)
++ Skipping check for initial transients
++ Input polort=3; Longest run=436.0 s; Recommended minimum polort=3 ++ OK ++
++ -stim_times using TR=2 s for stimulus timing conversion
++ -stim_times using TR=2 s for any -iresp output datasets
++ [you can alter the -iresp TR via the -TR_times option]
++ ** -stim_times NOTE ** guessing GLOBAL times if 1 time per line; LOCAL otherwise
++ ** GUESSED ** -stim_times 1 using LOCAL times
++ ** GUESSED ** -stim_times 2 using LOCAL times
++ ** GUESSED ** -stim_times 3 using LOCAL times
++ ** GUESSED ** -stim_times 4 using LOCAL times
++ Number of time points: 1308 (before censor) ; 1282 (after)
+ Number of parameters: 34 [30 baseline ; 4 signal]
Killed
Subject Author Posted

3dDeconvolve - Killed

sarinopo July 23, 2014 02:05PM

Re: 3dDeconvolve - Killed

Emperor Zhark July 23, 2014 02:45PM

Re: 3dDeconvolve - Killed

rick reynolds July 23, 2014 03:39PM

Re: 3dDeconvolve - Killed

sarinopo July 24, 2014 03:20PM