AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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v1nch
October 17, 2014 03:47PM
This is the output when I use a grey matter mask on the 3dTcorr1d command, and the same mask for the FDRmask option. I've tried with and without a mask for generating the correlations and the q value is still capped. Without the grey matter mask option at the 3dTcorr1d command, the 3dhistog is similar but doesn't have the voxel maxima at r ~ 0.

#Magnitude Freq Cum_Freq
-0.814242 2 2
-0.797948 4 6
-0.781653 8 14
-0.765359 13 27
-0.749065 24 51
-0.732771 32 83
-0.716476 41 124
-0.700182 80 204
-0.683888 110 314
-0.667593 178 492
-0.651299 244 736
-0.635005 285 1021
-0.618710 359 1380
-0.602416 509 1889
-0.586122 647 2536
-0.569828 758 3294
-0.553533 1022 4316
-0.537239 1233 5549
-0.520945 1526 7075
-0.504650 1840 8915
-0.488356 2157 11072
-0.472062 2636 13708
-0.455767 3077 16785
-0.439473 3759 20544
-0.423179 4255 24799
-0.406885 4917 29716
-0.390590 5652 35368
-0.374296 6176 41544
-0.358002 7063 48607
-0.341707 7859 56466
-0.325413 8609 65075
-0.309119 9531 74606
-0.292825 10443 85049
-0.276530 11488 96537
-0.260236 12552 109089
-0.243942 13475 122564
-0.227647 14534 137098
-0.211353 15785 152883
-0.195059 16888 169771
-0.178764 17600 187371
-0.162470 18838 206209
-0.146176 19368 225577
-0.129882 20347 245924
-0.113587 20957 266881
-0.097293 21765 288646
-0.080999 21810 310456
-0.064704 22689 333145
-0.048410 22900 356045
-0.032116 23239 379284
-0.015821 3873256 4252540
0.000473 23696 4276236
0.016767 23640 4299876
0.033061 22861 4322737
0.049356 22764 4345501
0.065650 22487 4367988
0.081944 21891 4389879
0.098239 21003 4410882
0.114533 20212 4431094
0.130827 19291 4450385
0.147121 18220 4468605
0.163416 17271 4485876
0.179710 16252 4502128
0.196004 15324 4517452
0.212299 14170 4531622
0.228593 13160 4544782
0.244887 12099 4556881
0.261182 11145 4568026
0.277476 10043 4578069
0.293770 9039 4587108
0.310064 8133 4595241
0.326359 7343 4602584
0.342653 6437 4609021
0.358947 5630 4614651
0.375242 4971 4619622
0.391536 4202 4623824
0.407830 3663 4627487
0.424125 3129 4630616
0.440419 2585 4633201
0.456713 2132 4635333
0.473007 1716 4637049
0.489302 1450 4638499
0.505596 1142 4639641
0.521890 872 4640513
0.538185 715 4641228
0.554479 531 4641759
0.570773 421 4642180
0.587067 322 4642502
0.603362 242 4642744
0.619656 195 4642939
0.635950 134 4643073
0.652245 106 4643179
0.668539 78 4643257
0.684833 48 4643305
0.701128 33 4643338
0.717422 23 4643361
0.733716 13 4643374
0.750010 13 4643387
0.766305 6 4643393
0.782599 7 4643400
0.798893 1 4643401
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Subject Author Posted

Which AFNI program can do this?

v1nch September 23, 2014 04:17PM

Re: Which AFNI program can do this?

Peter Molfese September 23, 2014 06:56PM

Re: Which AFNI program can do this?

rick reynolds September 23, 2014 09:18PM

Re: Which AFNI program can do this?

v1nch September 24, 2014 09:25AM

Re: Which AFNI program can do this?

Peter Molfese September 24, 2014 12:49PM

Re: Which AFNI program can do this?

v1nch October 17, 2014 11:43AM

Re: Which AFNI program can do this?

rick reynolds October 17, 2014 12:28PM

Re: Which AFNI program can do this?

v1nch October 17, 2014 02:03PM

Re: Which AFNI program can do this?

rick reynolds October 17, 2014 02:47PM

Re: Which AFNI program can do this?

v1nch October 17, 2014 03:47PM

Re: Which AFNI program can do this?

rick reynolds October 17, 2014 11:33PM

Re: Which AFNI program can do this?

v1nch October 20, 2014 09:38AM

Re: Which AFNI program can do this?

v1nch October 22, 2014 09:29AM

Re: Which AFNI program can do this?

rick reynolds October 22, 2014 10:17AM

Re: Which AFNI program can do this?

rick reynolds October 22, 2014 04:08PM