Hi Rick,

My proc.py finished over night, and it looks like this problem is happening with about 30% of my subjects. I don't know if that points to this being a problem with my proc.py command or something...

In any case, I can't see anything visually wrong with the pb03.*.lh.r01.surf.niml.dset files for those subjects. Is there anything else I can do to check these files?

If I understand the single subject script right, it looks like the lh files are completing, but when they finish they generate the parameter file surf.smooth.params.1D that gets used for the rh. On those that work, the Niter in the surf.smooth.params.1D gets set to 1, but on the ones in question it gets set to 0 which causes the rh fail. So, even though the lh finishes, something wrong is happening with it, that is making it set the Niter to 0, is that right?

Thanks

Walker

Update: It looks like taking out the -blurmaster and -detrend_master commands allows SurfSmooth to finish successfully. Based on the SurfSmooth -help, it sounds like I wouldn't want to do this as a work around, but I thought it might be useful troubleshooting information.



Edited 2 time(s). Last edit at 10/16/2014 01:31PM by wped.