AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 29, 2014 01:10AM
Hello Rick,

Thanks for the reply.
However, it turned out that I need to use following line to convert my data into brick:
Dimon -GERT_Reco -gert_nz 33 -gert_to3d_prefix $subj.r0$block -infile_prefix raw_data/$subj/F{$block}P/* -quit -gert_filename raw_data/$subj/F{$block}P/tmp$block -overwrite
However, the error message says:
invalid option <raw_data/subj01/F1P/afR223622001-0002-00001-000001-01.img

Do you have any idea how to fix it?
Thanks!

Veda
Subject Author Posted

problem with to3d

Veda October 20, 2014 11:59AM

Re: problem with to3d

rick reynolds October 20, 2014 02:54PM

Re: problem with to3d

Veda October 29, 2014 01:10AM

Re: problem with to3d

rick reynolds October 29, 2014 09:17AM

Re: problem with to3d

Veda October 29, 2014 12:32PM

Re: problem with to3d

rick reynolds October 29, 2014 01:44PM

Re: problem with to3d

Veda October 29, 2014 10:17PM

Re: problem with to3d

rick reynolds October 29, 2014 10:36PM

Re: problem with to3d

Veda October 29, 2014 11:24PM

Re: problem with to3d

Daniel Glen October 30, 2014 02:59PM

Re: problem with to3d

Daniel Glen October 20, 2014 03:09PM

Re: problem with to3d

Veda October 29, 2014 01:30AM