AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 21, 2014 04:30PM
I think that, in going through the warping process, your data set has lost its table-- so, probably when you view 'mask_aseg_nl_1.4+tlrc' in an AFNI window, you don't see labeltable functionality on it.

However, I have it on good authority (-> Rick's) that you can reattach it or copy it using 3drefit, with either of the following options:

-labeltable TTT Inset the label table TTT in the .HEAD file.
The label table format is described in README.environment
under the heading: 'Variable: AFNI_VALUE_LABEL_DTABLE'
See also -copytables

-copytables tabset Copies labeltables AND/OR atlas point lists, if any,
from tabset to the input dataset.
'-copyaux' occurs BEFORE the '-sub' operations below,
so you can use those to alter the auxiliary data
that is copied from tabset.


After that, you should be set for 3dNetCorr.

--pt
Subject Author Posted

3dNetCorr

storrisi October 20, 2014 12:55PM

Re: 3dNetCorr

ptaylor October 20, 2014 02:14PM

Re: 3dNetCorr

storrisi October 21, 2014 12:58PM

Re: 3dNetCorr

ptaylor October 21, 2014 02:20PM

Re: 3dNetCorr

storrisi October 21, 2014 03:41PM

Re: 3dNetCorr

ptaylor October 21, 2014 03:55PM

Re: 3dNetCorr

storrisi October 21, 2014 04:02PM

Re: 3dNetCorr

ptaylor October 21, 2014 04:30PM

Re: 3dNetCorr

storrisi October 21, 2014 05:38PM