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Dear AFNI users-

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The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 29, 2014 02:09PM
Hello,

I'm trying to understand why things go wrong (see my previous posts).

I was again trying to compare activations obtained in the surface space to those obtained in the volume space (same data, same GLM analysis but done separately) and I had crash of suma

Here the commands I used :
afni -niml &
underlay NS20_SurfVol_Alnd_Exp+orig (NS20 being my subject id)

then I started suma:
suma -spec /data/clampadapt/NS20/anatomy/NS20/SUMA/std.141.NS20_both.spec -sv NS20_SurfVol_Alnd_Exp+orig

then, from the afni window, I asked for a new afni viewer in which I read the result of the givem glm:
underlay : anat_al+orig
overlay : stats.Xns20_sa_only+orig (result of the glm in the volume space)

then from the suma windiw i loaded (ctrl-s) the file stats.NS20.rh.sa_only2.niml.dset (result of the glm in the surf space)

to compare and here after some move of the cursor Suma crashed:


-- Error SUMA_Set_Menu_Widget (SUMA_display.c:10002):
NULL widget struct
-- Error SUMA_Set_Menu_Widget (SUMA_display.c:10002):
NULL widget struct

Fatal Signal 11 (SIGSEGV) received
SUMA_InitRangeTable
SUMA_SwitchColPlaneIntensity_one
SUMA_SwitchColPlaneIntensity
SUMA_cb_SwitchIntensity
Bottom of Debug Stack
** AFNI version = AFNI_2011_12_21_1014 Compile date = Sep 30 2013
** [[Precompiled binary macosx_10.7_Intel_64: Sep 30 2013]]
** Program Abort **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
++ NIML connection closed from shm:WeLikeElvis:1M (shm:WeLikeElvis:1M,ZERO)

I don't know, maybe this can help you to understand my problem.
Thanks again for your attention.
Alain
Subject Author Posted

Suma group analysis

Alain Guillaume October 28, 2014 02:51PM

Re: Suma group analysis

rick reynolds October 28, 2014 03:44PM

Re: Suma group analysis

Alain Guillaume October 28, 2014 04:08PM

Re: Suma group analysis

Alain Guillaume October 29, 2014 02:09PM

Re: Suma group analysis

ziad October 29, 2014 04:53PM

Re: Suma group analysis

Alain Guillaume October 30, 2014 12:30PM

Re: Suma group analysis

ziad November 03, 2014 09:39AM