AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
November 20, 2014 09:29PM
Hello Gunjan,

What do you mean by not having the BRIK extension. Can you show me the output of:
ls PPP*

Also, what does the following command give:

3dinfo -min -max a.nii

give you?

Is this a normal T1 volume or was is preprocessed.

And lastly, you really should not be running anything from ~/abin

You should set your path to point to ~/abin and run your commands from the directories where your data lies.

cheers
Ziad



Edited 1 time(s). Last edit at 11/20/2014 09:31PM by ziad.
Subject Author Posted

Regarding 3dSkullStrip

Gunjan November 06, 2014 05:48AM

Re: Regarding 3dSkullStrip eye rolling smiley

Peter Molfese November 06, 2014 10:19AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 07, 2014 08:20AM

Re: Regarding 3dSkullStrip eye rolling smiley

Peter Molfese November 07, 2014 10:07AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 08, 2014 06:05AM

Re: Regarding 3dSkullStrip eye rolling smiley

Peter Molfese November 08, 2014 08:50AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 10, 2014 02:28AM

Re: Regarding 3dSkullStrip eye rolling smiley

Peter Molfese November 10, 2014 10:24AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 11, 2014 01:53AM

Re: Regarding 3dSkullStrip eye rolling smiley

Peter Molfese November 11, 2014 09:38AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 18, 2014 05:18AM

Re: Regarding 3dSkullStrip eye rolling smiley

Isaac Schwabacher November 18, 2014 11:03AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 19, 2014 04:43AM

Re: Regarding 3dSkullStrip eye rolling smiley

Isaac Schwabacher November 19, 2014 10:11AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 20, 2014 03:48AM

Re: Regarding 3dSkullStrip eye rolling smiley

Isaac Schwabacher November 20, 2014 10:57AM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 20, 2014 02:03AM

Re: Regarding 3dSkullStrip eye rolling smiley

ziad November 20, 2014 09:29PM

Re: Regarding 3dSkullStrip eye rolling smiley

Gunjan November 22, 2014 05:42AM

Re: Regarding 3dSkullStrip eye rolling smiley

Daniel Glen November 21, 2014 08:35AM

Re: Regarding 3dSkullStrip eye rolling smiley

Daniel Glen November 22, 2014 06:52AM