AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
November 07, 2014 10:16AM
Hello!

I am analyzing a relatively simple event-related design with 5 second trials throughout the run, each of which begin with a stimulus that has a duration of 3 seconds. The trials can be relatively close in time, and I'm trying to tease out effects in a few stimulus categories (presented randomly). I am giving AFNI my stim times in real time (seconds) -- not necessarily associated with TRs. However, I assume that it isn't ideal to model these 3 second events as "pulse" events, but rather make sure that the HRF "knows" the events are 3 seconds long. Is this necessary to include in the proc py script, and if so, where can we inform the model that the stimuli have durations of 3 seconds?

Thank you kindly!

cephalopod
Subject Author Posted

Stimulus Duration

cephalopod November 07, 2014 10:16AM

Re: Stimulus Duration

shanusmagnus November 08, 2014 03:08PM

Re: Stimulus Duration

cephalopod November 12, 2014 09:26AM

Re: Stimulus Duration

shanusmagnus November 12, 2014 11:02AM

Re: Stimulus Duration

Daniel Glen November 12, 2014 12:36PM

Re: Stimulus Duration

mb November 25, 2014 03:42PM

Re: Stimulus Duration

rick reynolds November 25, 2014 04:06PM

Re: Stimulus Duration

mb November 25, 2014 05:00PM

Re: Stimulus Duration

rick reynolds November 25, 2014 04:12PM