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Pascale

November 28, 2014 06:43PM

Registered: 9 years ago
Posts: 16

Hello again,

So it went trough it and produced the desired output, thanks!
However, I noticed that the output does not include interactions with the continuous covariate (response duration) so I ran a few other versions of my script including new glt contratss and interactions but I never got it to finish. The p^rogram does not complain but it hangs after the data specification part right where it says:

"If the program hangs here for more than, for example, half an hour, kill the process because the model specification or the GLT coding is likely inappropriate."

The helpfile suggests that continuous covariates can be included in glts but perhaps I coded it incorrectely? My modified command is below. Any advice would be hugely appreciated!
Thanks!
Pascale

3dLME \
-prefix Group_ANOVA_Production_DurationContrasts_LME.lh.niml.dset \
-jobs 4 \
-qVars "duration" \
-ranEff '~duration' \
-SS_type 3 \
-model "group*syllable*sequence+duration" \
-num_glt 11 \
-gltLabel 1 yng_duration -gltCode 1 'group : 1*yng duration : ' \
-gltLabel 2 old_duration -gltCode 2 'group : 1*old duration : ' \
-gltLabel 3 groupdiff_duration -gltCode 3 'group : 1*yng -1*old duration : ' \
-gltLabel 4 yng_sequence_duration -gltCode 4 'group : 1*yng sequence : 1*complex -1*simple duration : ' \
-gltLabel 5 yng_syllable_duration -gltCode 5 'group : 1*yng syllable : 1*complex -1*simple duration : ' \
-gltLabel 6 old_sequence_duration -gltCode 6 'group : 1*old sequence : 1*complex -1*simple duration : ' \
-gltLabel 7 old_syllable_duration -gltCode 7 'group : 1*old syllable : 1*complex -1*simple duration : ' \
-gltLabel 8 groupdiff_sequence_duration -gltCode 8 'group : 1*yng -1*old sequence : 1*complex -1*simple duration : ' \
-gltLabel 9 groupdiff_syllable_duration -gltCode 9 'group : 1*yng -1*old syllable : 1*complex -1*simple duration : ' \
-gltLabel 10 syllable_duration -gltCode 10 'syllable : 1*complex -1*simple duration : ' \
-gltLabel 11 sequence_duration -gltCode 11 'sequence : 1*complex -1*simple duration : ' \
-dataTable \
Subj group syllable sequence duration InputFile \
S1 yng simple simple 1.730 G1S02.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S1 yng simple complex 1.840 G1S02.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S1 yng complex simple 1.870 G1S02.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S1 yng complex complex 2.020 G1S02.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S2 yng simple simple 2.340 G1S05.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S2 yng simple complex 2.360 G1S05.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S2 yng complex simple 2.400 G1S05.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S2 yng complex complex 2.460 G1S05.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S3 yng simple simple 1.780 G1S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S3 yng simple complex 1.950 G1S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S3 yng complex simple 2.000 G1S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S3 yng complex complex 2.350 G1S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S4 yng simple simple 1.230 G1S07.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S4 yng simple complex 1.260 G1S07.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S4 yng complex simple 1.370 G1S07.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S4 yng complex complex 1.580 G1S07.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S5 yng simple simple 1.320 G1S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S5 yng simple complex 1.590 G1S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S5 yng complex simple 1.520 G1S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S5 yng complex complex 2.000 G1S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S6 yng simple simple 1.300 G1S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S6 yng simple complex 1.260 G1S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S6 yng complex simple 1.470 G1S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S6 yng complex complex 1.590 G1S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S7 yng simple simple 1.390 G1S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S7 yng simple complex 1.250 G1S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S7 yng complex simple 1.560 G1S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S7 yng complex complex 1.700 G1S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S8 yng simple simple 1.720 G1S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S8 yng simple complex 1.800 G1S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S8 yng complex simple 1.800 G1S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S8 yng complex complex 2.050 G1S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S9 yng simple simple 1.960 G1S15.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S9 yng simple complex 2.110 G1S15.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S9 yng complex simple 2.060 G1S15.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S9 yng complex complex 2.360 G1S15.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S10 yng simple simple 1.610 G1S16.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S10 yng simple complex 1.750 G1S16.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S10 yng complex simple 1.730 G1S16.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S10 yng complex complex 2.020 G1S16.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S11 yng simple simple 1.320 G1S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S11 yng simple complex 1.560 G1S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S11 yng complex simple 1.670 G1S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S11 yng complex complex 1.950 G1S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S12 yng simple simple 1.680 G1S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S12 yng simple complex 1.930 G1S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S12 yng complex simple 1.900 G1S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S12 yng complex complex 2.160 G1S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S13 yng simple simple 1.260 G1S21.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S13 yng simple complex 1.560 G1S21.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S13 yng complex simple 1.520 G1S21.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S13 yng complex complex 1.940 G1S21.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S14 old simple simple 1.850 G2S01.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S14 old simple complex 2.010 G2S01.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S14 old complex simple 1.860 G2S01.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S14 old complex complex 2.430 G2S01.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S15 old simple simple 1.410 G2S03.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S15 old simple complex 1.470 G2S03.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S15 old complex simple 1.550 G2S03.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S15 old complex complex 1.880 G2S03.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S16 old simple simple 1.470 G2S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S16 old simple complex 1.750 G2S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S16 old complex simple 1.680 G2S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S16 old complex complex 2.150 G2S06.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S17 old simple simple 1.980 G2S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S17 old simple complex 2.060 G2S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S17 old complex simple 2.010 G2S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S17 old complex complex 2.440 G2S08.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S18 old simple simple 1.510 G2S09.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S18 old simple complex 1.730 G2S09.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S18 old complex simple 1.680 G2S09.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S18 old complex complex 2.090 G2S09.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S19 old simple simple 1.870 G2S11.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S19 old simple complex 1.780 G2S11.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S19 old complex simple 1.960 G2S11.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S19 old complex complex 2.610 G2S11.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S20 old simple simple 1.920 G2S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S20 old simple complex 2.500 G2S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S20 old complex simple 2.190 G2S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S20 old complex complex 2.980 G2S12.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S21 old simple simple 1.870 G2S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S21 old simple complex 1.920 G2S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S21 old complex simple 2.060 G2S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S21 old complex complex 2.490 G2S13.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S22 old simple simple 2.040 G2S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S22 old simple complex 2.500 G2S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S22 old complex simple 2.310 G2S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S22 old complex complex 2.800 G2S14.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S23 old simple simple 1.900 G2S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S23 old simple complex 2.070 G2S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S23 old complex simple 2.130 G2S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S23 old complex complex 2.470 G2S17.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S24 old simple simple 1.930 G2S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S24 old simple complex 2.030 G2S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S24 old complex simple 2.080 G2S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S24 old complex complex 2.530 G2S18.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S25 old simple simple 1.980 G2S20.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S25 old simple complex 2.570 G2S20.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S25 old complex simple 2.120 G2S20.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S25 old complex complex 2.790 G2S20.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S26 old simple simple 1.840 G2S22.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S26 old simple complex 2.020 G2S22.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S26 old complex simple 2.020 G2S22.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S26 old complex complex 2.790 G2S22.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]' \
S27 old simple simple 1.810 G2S23.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SS#0_Coef]' \
S27 old simple complex 1.960 G2S23.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[SC#0_Coef]' \
S27 old complex simple 1.900 G2S23.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CS#0_Coef]' \
S27 old complex complex 2.360 G2S23.Norm.Study1SpeechProd.fwhm6mm.lh.niml.dset'[CC#0_Coef]'

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Subject	Author	Posted
3dMVM issue with datatable	Pascale	November 26, 2014 07:31PM
Re: 3dMVM issue with datatable	gang	November 26, 2014 07:50PM
Re: 3dMVM issue with datatable	Pascale	November 27, 2014 07:36AM
Re: 3dMVM issue with datatable	gang	November 27, 2014 02:24PM
Re: 3dMVM issue with datatable	Pascale	November 27, 2014 07:23PM
Re: 3dMVM issue with datatable	Pascale	November 28, 2014 06:43PM
Re: 3dMVM issue with datatable	gang	November 29, 2014 02:05PM
Re: 3dMVM issue with datatable	Pascale	November 30, 2014 11:17AM