AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Tim Meeker
December 08, 2014 09:16AM
Hi AFNI experts,

I am trying to use 3dMVM for a multivariate model and I keep getting the following error:

Error in `[.data.frame`(lop$dataStr, , jj) : undefined columns selected
Calls: process.MVM.opts -> [ -> [.data.frame
Execution halted

I have attached my full script as a text file. In addition, I have appended an abbreviated version of the script I'm using.

Thanks,
Tim Meeker

3dMVM -prefix tDCSpinprickprobecentpainintGLMblock4 -jobs 4 \
-bsVars 1 \
-wsVars "probeforce*treatment" \
-wsE2 \
-qVars probecentpainint \
-num_glt 3 \
-gltLabel 1 Lar_vs_Med -gltCode 1 probeforce: 1*Lar -1*Med \
-gltLabel 2 Lar_vs_Sma -gltCode 2 probeforce: 1*Lar -1*Sma \
-gltLabel 3 Med_vs_Sma -gltCode 3 probeforce: 1*Med -1*Sma \
-dataTable \
Subj probeforce treatment probecentpainint InputFile \
ctd002 Sma anode 35.7037037 Smastats.ctd002anodepph2block4+tlrc \
ctd002 Sma cathode -10.96296296 Smastats.ctd002cathodepph2block4+tlrc \
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Subject Author Posted

Error when using 3dMVM

Tim Meeker December 08, 2014 09:16AM

Re: Error when using 3dMVM

gang December 08, 2014 09:30AM

Re: Error when using 3dMVM

Tim Meeker December 10, 2014 04:51AM

Re: Error when using 3dMVM

gang December 10, 2014 11:14AM

Re: Error when using 3dMVM

Tim Meeker December 10, 2014 12:47PM

Re: Error when using 3dMVM

Tim Meeker December 10, 2014 01:43PM

Re: Error when using 3dMVM

gang December 10, 2014 01:52PM

Re: Error when using 3dMVM

Tim Meeker December 10, 2014 02:49PM