AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 21, 2015 03:24PM
When I attempt to use 3dSkullStrip, this pops out:

dyld: Library not loaded: /sw/lib/libglib-1.2.0.dylib
Referenced from: /Users/Alma/abin/3dSkullStrip
Reason: image not found
Trace/BPT trap

So I tried this: fink install glib

It failed, and it seems like things start to go wrong at this step:

checking for thread implementation... none available
configure: warning: You do not have any known thread system on your
computer. glib will not be thread safe on your computer.
checking necessary linker options...
configure: warning: the 'g_get_(user_name|real_name|home_dir|tmp_dir)'
functions will not be MT-safe during their first call because
there is no working 'getpwuid_r' on your system.
configure: warning: the 'g_date_set_time' function will not be MT-safe
because there is no 'localtime_r' on your system.
checking system definitions for POLLIN POLLOUT POLLPRI POLLERR POLLHUP POLLNVAL... failed


Help please! How do I fix this?
-Alma
Subject Author Posted

3dSkullStrip/glib issues, Mac OSX 10.6.8

Alma January 21, 2015 03:24PM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Daniel Glen January 21, 2015 04:25PM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Alma January 21, 2015 04:44PM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Daniel Glen January 21, 2015 05:06PM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Alma January 21, 2015 05:09PM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Brian Pittman January 21, 2015 06:03PM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Alma January 22, 2015 10:25AM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

rick reynolds January 22, 2015 10:51AM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Alma January 22, 2015 10:58AM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Alma January 22, 2015 11:55AM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

Alma January 22, 2015 12:10PM

Re: 3dSkullStrip/glib issues, Mac OSX 10.6.8

rick reynolds January 22, 2015 01:03PM