AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 26, 2015 12:38PM
Hi Danny,

That looks fine at a glance.

One point I am not sure about is the use of -polort 2.
Presumably there was a polort in the original regression.
But why remove even a linear trend in the betas?

While I might be inclined to just demean betas.nii and
then get the correlations with 3dTcorr1D, the results
should be the same (aside from the polort question).

It seems strange though if the single subject results
are only really strong near the seed to have them so
consistent as to generate significance all over the
brain. That seems difficult to address without looking
closely at the data.

- rick
Subject Author Posted

3dfim+ Ideal File

Danny March 25, 2015 05:28PM

Re: 3dfim+ Ideal File

rick reynolds March 26, 2015 09:03AM

Re: 3dfim+ Ideal File

Danny March 26, 2015 10:28AM

Re: 3dfim+ Ideal File

rick reynolds March 26, 2015 11:12AM

Re: 3dfim+ Ideal File

Danny March 26, 2015 11:49AM

Re: 3dfim+ Ideal File

rick reynolds March 26, 2015 12:38PM

Re: 3dfim+ Ideal File

Danny March 26, 2015 12:55PM

Re: 3dfim+ Ideal File

rick reynolds March 26, 2015 03:00PM

Re: 3dfim+ Ideal File

Danny March 26, 2015 04:10PM

Re: 3dfim+ Ideal File

rick reynolds March 26, 2015 04:33PM

Re: 3dfim+ Ideal File

Danny March 27, 2015 12:24PM