AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
April 01, 2015 01:13AM
Hi,

I ran 3dREMLfit using the proc_afni.py script:

3dREMLfit -matrix X.xmat.1D -input pb04.Imagination001.r01.scale+orig.HEAD \
-fout -tout -Rbuck stats.Imagination001_REML -Rvar stats.Imagination001_REMLvar \
-Rfitts fitts.Imagination001_REML -Rerrts errts.Imagination001_REML -verb $*

Now, I want to get the p-value for the test statistic for detecting activation at each voxel for the values inside the mask.

Is there a function I can look at to do this? Or is this information somewhere in the many miriad files that have been created so far?

Many thanks again!

Best wishes,
Ranjan



Edited 1 time(s). Last edit at 04/01/2015 01:14AM by maitra.
Subject Author Posted

is it possible to obtain p-values on output of 3dREMLfit

maitra April 01, 2015 01:13AM

Re: is it possible to obtain p-values on output of 3dREMLfit

gang April 01, 2015 09:55AM

Re: is it possible to obtain p-values on output of 3dREMLfit

maitra April 01, 2015 11:34AM

Re: is it possible to obtain p-values on output of 3dREMLfit

Emperor Zhark April 01, 2015 11:55AM

Re: is it possible to obtain p-values on output of 3dREMLfit

maitra April 01, 2015 03:47PM

Re: is it possible to obtain **one-sided** p-values on output of 3dREMLfit

maitra April 02, 2015 11:18PM

Re: is it possible to obtain **one-sided** p-values on output of 3dREMLfit

gang April 03, 2015 09:53AM

Re: is it possible to obtain **one-sided** p-values on output of 3dREMLfit

maitra April 03, 2015 10:04AM

Re: is it possible to obtain **one-sided** p-values on output of 3dREMLfit

gang April 03, 2015 10:21AM

Re: is it possible to obtain **one-sided** p-values on output of 3dREMLfit

maitra April 03, 2015 10:29AM