AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 16, 2015 11:53AM
Hi Rick,

Just as an update, I noticed that there was a file called "upload.dcm" that was not included in the image pattern call...so I changed the code to this


Dimon -infile_pattern "*dcm" \
-gert_create_dataset \
-dicom_org \
-sort_by_acq_time \
-gert_write_as_nifti \
-gert_to3d_prefix ${subID}_rest

but now it looks like each step in the time series is switching between A-P... I'll email the file you requested
Subject Author Posted

DIMON: Handling missing files

Andrew_Lynn April 15, 2015 08:13PM

Re: DIMON: Handling missing files

rick reynolds April 16, 2015 07:59AM

Re: DIMON: Handling missing files

Andrew_Lynn April 16, 2015 11:53AM

Re: DIMON: Handling missing files

Andrew_Lynn April 16, 2015 11:54AM

Re: DIMON: Handling missing files

jamielarshanson December 20, 2017 07:43PM

Re: DIMON: Handling missing files

rick reynolds December 21, 2017 09:07AM

Re: DIMON: Handling missing files

jamielarshanson December 21, 2017 11:03AM

Re: DIMON: Handling missing files

rick reynolds January 05, 2018 10:11AM

Re: DIMON: Handling missing files

jamielarshanson January 11, 2018 04:00PM