AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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dk
June 25, 2015 01:58PM
I'm trying to integrate AFNI into a shell script pipeline. I want to create a script that will open AFNI with a certain underlay and overlay to check registration, and then once AFNI is closed, the shell script should continue. I've got the opening AFNI with correct underlay and overlay down, however, when I close AFNI, it seems like the terminal hangs so I have to hit control-c to get out.

How do I get my shell script to resume as soon as AFNI is closed?
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Subject Author Posted

Integrating AFNI into shell script?

dk June 25, 2015 01:58PM

Re: Integrating AFNI into shell script?

rick reynolds June 25, 2015 04:30PM

Re: Integrating AFNI into shell script?

dk June 25, 2015 04:56PM

Re: Integrating AFNI into shell script?

rick reynolds June 25, 2015 09:20PM

Re: Integrating AFNI into shell script?

dk June 26, 2015 08:59AM