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AFNI Message Board
Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
| August 28, 2015 11:54AM | |
Mmm, the update went through without error, but for some reason I cannot launch afni anymore.
The new binaries were installed in ~/abin, which is still in my PATH, but for the command I tried (e.g. afni or 3dcalc), I get
Similar thing in tcsh.
The @* commands seem to work fine though.
Tried rebooting, no luck.
Tried rerunning @update.afni.binaries:
Any suggestion?
Cheers!
Sébastien
The new binaries were installed in ~/abin, which is still in my PATH, but for the command I tried (e.g. afni or 3dcalc), I get
bash: /home/bass/abin/afni: No such file or directory
Similar thing in tcsh.
The @* commands seem to work fine though.
Tried rebooting, no luck.
Tried rerunning @update.afni.binaries:
bass@ubuntu:/mnt/hgfs/workOnDropbox/projects/150422_decodingHRF/HRphenomenology$ @update.afni.binaries -package linux_xorg7 -- have AFNI binaries under /home/bass/abin -- install dir: using existing /home/bass/abin -- attempting to install package linux_xorg7 under install dir: /home/bass/abin... -- have install dir ++ working in new temp dir, .tmp.install ++ getting install prog linux_xorg7/@update.afni.binaries ... --2015-08-28 08:23:22-- [afni.nimh.nih.gov] Resolving afni.nimh.nih.gov (afni.nimh.nih.gov)... 156.40.187.114 Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|156.40.187.114|:80... connected. HTTP request sent, awaiting response... 200 OK Length: 24198 (24K) [text/plain] Saving to: ‘@update.afni.binaries’ 100%[===============================================================================>] 24,198 --.-K/s in 0.03s 2015-08-28 08:23:22 (782 KB/s) - ‘@update.afni.binaries’ saved [24198/24198] ++ using updated @update.afni.binaries, instead... ++ running: tcsh tmp.@update.afni.binaries -no_recur -package linux_xorg7 -- have AFNI binaries under /home/bass/abin -- install dir: using existing /home/bass/abin -- attempting to install package linux_xorg7 under install dir: /home/bass/abin... -- have install dir nuking old temporary directory... ++ working in new temp dir, .tmp.install -- skipping update of tmp.@update.afni.binaries ++ downloading test file linux_xorg7/afni ... --2015-08-28 08:23:22-- [afni.nimh.nih.gov] Resolving afni.nimh.nih.gov (afni.nimh.nih.gov)... 156.40.187.114 Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|156.40.187.114|:80... connected. HTTP request sent, awaiting response... 200 OK Length: 12766185 (12M) [text/plain] Saving to: ‘afni’ 100%[===============================================================================>] 12,766,185 797KB/s in 17s 2015-08-28 08:23:40 (719 KB/s) - ‘afni’ saved [12766185/12766185] ++ update needed, installing... ++ downloading full linux_xorg7.tgz package... --2015-08-28 08:23:41-- [afni.nimh.nih.gov] Resolving afni.nimh.nih.gov (afni.nimh.nih.gov)... 156.40.187.114 Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|156.40.187.114|:80... connected. HTTP request sent, awaiting response... 200 OK Length: 782304976 (746M) [application/x-gzip] Saving to: ‘linux_xorg7.tgz’ 100%[===============================================================================>] 782,304,976 829KB/s in 17m 5s 2015-08-28 08:40:46 (745 KB/s) - ‘linux_xorg7.tgz’ saved [782304976/782304976] ++ extracting package linux_xorg7... ++ backing up current binaries to auto_backup.linux_xorg7 nuking previous backup directory, auto_backup.linux_xorg7 ... ++ installing new binaries... ++ running apsearch -update_all_afni_help ... apsearch: Command not found. done, yay (binaries are under /home/bass/abin) ...finished, removing temp version, tmp.@update.afni.binariesNo change again. Plus I realized that by doing so I removed the backup of the working original version
Any suggestion?
Cheers!
Sébastien
| Subject | Author | Posted |
|---|---|---|
|
Sébastien Proulx | August 10, 2015 07:16PM |
|
Emperor Zhark | August 11, 2015 10:05AM |
|
Sébastien Proulx | August 27, 2015 11:14AM |
|
Sébastien Proulx | August 28, 2015 11:54AM |
|
rick reynolds | August 28, 2015 12:15PM |
|
rick reynolds | August 31, 2015 09:04AM |
|
Sébastien Proulx | August 31, 2015 12:52PM |
