AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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3dFoodie
August 20, 2015 02:39PM
Thank you for the response. When I change it to either of those I get the same error. In addition, I tried running it with 3dMVM. and still got the error below. Any suggestions would be appreciated. Thanks.

Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :
argument is of length zero
Calls: process.MVM.opts
Execution halted

The code is below (similar, but a little different now):

3dMVM -prefix CtxEGNG_RespXGroupXAge_fromRespXCtxGLMs_GraymaterMask_3DMVM_ss3 \
-mask MNI152_T1_3mm_brain_graymattermask.nii.gz \
-jobs 4 \
-bsVars "Group*Age" \
-wsVars "Target" \
-qVars "Age" \
-qVarCenters '23.77692' \
-num_glt 4 \
-gltLabel 1 'HC-BN_Go-Nogo' -gltCode 1 'Target : 1*Go -1*NoGo Group : -1*BN +1*HC' \
-gltLabel 2 'HC-BN_Nogo' -gltCode 2 'Target : 1*NoGo Group : -1*BN +1*HC' \
-gltLabel 3 'HC-BN_Go' -gltCode 3 'Group : -1*BN +1*HC Target : 1*Go' \
-gltLabel 4 'HC-BN_Nogo-Go' -gltCode 4 'Target : 1*NoGo -1*Go Group : -1*BN +1*HC' \
-dataTable \
Subj Age Target Group InputFile\
BN100 22.5 Go BN BN_CtxEGNG_RespXCtx_BN100_bucket+tlrc'[Go#0_Coef]'\
BN100 22.5 NoGo BN BN_CtxEGNG_RespXCtx_BN100_bucket+tlrc'[NoGo#0_Coef]'\
BN101 26.4 Go BN BN_CtxEGNG_RespXCtx_BN101_bucket+tlrc'[Go#0_Coef]'\
BN101 26.4 NoGo BN BN_CtxEGNG_RespXCtx_BN101_bucket+tlrc'[NoGo#0_Coef]'\
BN102 23.8 Go BN BN_CtxEGNG_RespXCtx_BN102_bucket+tlrc'[Go#0_Coef]'\
BN102 23.8 NoGo BN BN_CtxEGNG_RespXCtx_BN102_bucket+tlrc'[NoGo#0_Coef]'\
BN103 22.2 Go BN BN_CtxEGNG_RespXCtx_BN103_bucket+tlrc'[Go#0_Coef]'\
BN103 22.2 NoGo BN BN_CtxEGNG_RespXCtx_BN103_bucket+tlrc'[NoGo#0_Coef]'\
BN104 18.6 Go BN BN_CtxEGNG_RespXCtx_BN104_bucket+tlrc'[Go#0_Coef]'\
BN104 18.6 NoGo BN BN_CtxEGNG_RespXCtx_BN104_bucket+tlrc'[NoGo#0_Coef]'\
BN105 28.7 Go BN BN_CtxEGNG_RespXCtx_BN105_bucket+tlrc'[Go#0_Coef]'\
BN105 28.7 NoGo BN BN_CtxEGNG_RespXCtx_BN105_bucket+tlrc'[NoGo#0_Coef]'\
BN106 18.4 Go BN BN_CtxEGNG_RespXCtx_BN106_bucket+tlrc'[Go#0_Coef]'\
BN106 18.4 NoGo BN BN_CtxEGNG_RespXCtx_BN106_bucket+tlrc'[NoGo#0_Coef]'\
BN107 28.4 Go BN BN_CtxEGNG_RespXCtx_BN107_bucket+tlrc'[Go#0_Coef]'\
BN107 28.4 NoGo BN BN_CtxEGNG_RespXCtx_BN107_bucket+tlrc'[NoGo#0_Coef]'\
BN110 29.2 Go BN BN_CtxEGNG_RespXCtx_BN110_bucket+tlrc'[Go#0_Coef]'\
BN110 29.2 NoGo BN BN_CtxEGNG_RespXCtx_BN110_bucket+tlrc'[NoGo#0_Coef]'\
BN111 32.8 Go BN BN_CtxEGNG_RespXCtx_BN111_bucket+tlrc'[Go#0_Coef]'\
BN111 32.8 NoGo BN BN_CtxEGNG_RespXCtx_BN111_bucket+tlrc'[NoGo#0_Coef]'\
BN114 22.3 Go BN BN_CtxEGNG_RespXCtx_BN114_bucket+tlrc'[Go#0_Coef]'\
BN114 22.3 NoGo BN BN_CtxEGNG_RespXCtx_BN114_bucket+tlrc'[NoGo#0_Coef]'\
BN115 21.5 Go BN BN_CtxEGNG_RespXCtx_BN115_bucket+tlrc'[Go#0_Coef]'\
BN115 21.5 NoGo BN BN_CtxEGNG_RespXCtx_BN115_bucket+tlrc'[NoGo#0_Coef]'\
BN116 22.2 Go BN BN_CtxEGNG_RespXCtx_BN116_bucket+tlrc'[Go#0_Coef]'\
BN116 22.2 NoGo BN BN_CtxEGNG_RespXCtx_BN116_bucket+tlrc'[NoGo#0_Coef]'\
BN118 24.1 Go BN BN_CtxEGNG_RespXCtx_BN118_bucket+tlrc'[Go#0_Coef]'\
BN118 24.1 NoGo BN BN_CtxEGNG_RespXCtx_BN118_bucket+tlrc'[NoGo#0_Coef]'\
BN119 27.3 Go BN BN_CtxEGNG_RespXCtx_BN119_bucket+tlrc'[Go#0_Coef]'\
BN119 27.3 NoGo BN BN_CtxEGNG_RespXCtx_BN119_bucket+tlrc'[NoGo#0_Coef]'\
BN120 23.3 Go BN BN_CtxEGNG_RespXCtx_BN120_bucket+tlrc'[Go#0_Coef]'\
BN120 23.3 NoGo BN BN_CtxEGNG_RespXCtx_BN120_bucket+tlrc'[NoGo#0_Coef]'\
BN121 31.6 Go BN BN BN_CtxEGNG_RespXCtx_BN121_bucket+tlrc'[Go#0_Coef]'\
BN121 31.6 NoGo BN BN_CtxEGNG_RespXCtx_BN121_bucket+tlrc'[NoGo#0_Coef]'\
BN122 30.8 Go BN BN_CtxEGNG_RespXCtx_BN122_bucket+tlrc'[Go#0_Coef]'\
BN122 30.8 NoGo BN BN_CtxEGNG_RespXCtx_BN122_bucket+tlrc'[NoGo#0_Coef]'\
BN125 24.3 Go BN BN_CtxEGNG_RespXCtx_BN125_bucket+tlrc'[Go#0_Coef]'\
BN125 24.3 NoGo BN BN_CtxEGNG_RespXCtx_BN125_bucket+tlrc'[NoGo#0_Coef]'\
SC01717 20.5 Go HC BN_CtxEGNG_RespXCtx_SC01717_bucket+tlrc'[Go#0_Coef]'\
SC01717 20.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01717_bucket+tlrc'[NoGo#0_Coef]'\
SC01792 20.1 Go HC BN_CtxEGNG_RespXCtx_SC01792_bucket+tlrc'[Go#0_Coef]'\
SC01792 20.1 NoGo HC BN_CtxEGNG_RespXCtx_SC01792_bucket+tlrc'[NoGo#0_Coef]'\
SC01793 18.3 Go HC BN_CtxEGNG_RespXCtx_SC01793_bucket+tlrc'[Go#0_Coef]'\
SC01793 18.3 NoGo HC BN_CtxEGNG_RespXCtx_SC01793_bucket+tlrc'[NoGo#0_Coef]'\
SC01818 19.9 Go HC BN_CtxEGNG_RespXCtx_SC01818_bucket+tlrc'[Go#0_Coef]'\
SC01818 19.9 NoGo HC BN_CtxEGNG_RespXCtx_SC01818_bucket+tlrc'[NoGo#0_Coef]'\
SC01868 24.1 Go HC BN_CtxEGNG_RespXCtx_SC01868_bucket+tlrc'[Go#0_Coef]'\
SC01868 24.1 NoGo HC BN_CtxEGNG_RespXCtx_SC01868_bucket+tlrc'[NoGo#0_Coef]'\
SC01888 21.0 Go HC BN_CtxEGNG_RespXCtx_SC01888_bucket+tlrc'[Go#0_Coef]'\
SC01888 21.0 NoGo HC BN_CtxEGNG_RespXCtx_SC01888_bucket+tlrc'[NoGo#0_Coef]'\
SC01890 21.5 Go HC BN_CtxEGNG_RespXCtx_SC01890_bucket+tlrc'[Go#0_Coef]'\
SC01890 21.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01890_bucket+tlrc'[NoGo#0_Coef]'\
SC01891 23.8 Go HC BN_CtxEGNG_RespXCtx_SC01891_bucket+tlrc'[Go#0_Coef]'\
SC01891 23.8 NoGo HC BN_CtxEGNG_RespXCtx_SC01891_bucket+tlrc'[NoGo#0_Coef]'\
SC01892 23.5 Go HC BN_CtxEGNG_RespXCtx_SC01892_bucket+tlrc'[Go#0_Coef]'\
SC01892 23.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01892_bucket+tlrc'[NoGo#0_Coef]'\
SC01893 20.9 Go HC BN_CtxEGNG_RespXCtx_SC01893_bucket+tlrc'[Go#0_Coef]'\
SC01893 20.9 NoGo HC BN_CtxEGNG_RespXCtx_SC01893_bucket+tlrc'[NoGo#0_Coef]'\
SC01906 21.7 Go HC BN_CtxEGNG_RespXCtx_SC01906_bucket+tlrc'[Go#0_Coef]'\
SC01906 21.7 NoGo HC BN_CtxEGNG_RespXCtx_SC01906_bucket+tlrc'[NoGo#0_Coef]'\
SC01916 24.8 Go HC BN_CtxEGNG_RespXCtx_SC01916_bucket+tlrc'[Go#0_Coef]'\
SC01916 24.8 NoGo HC BN_CtxEGNG_RespXCtx_SC01916_bucket+tlrc'[NoGo#0_Coef]'\
SC01921 18.7 Go HC BN_CtxEGNG_RespXCtx_SC01921_bucket+tlrc'[Go#0_Coef]'\
SC01921 18.7 NoGo HC BN_CtxEGNG_RespXCtx_SC01921_bucket+tlrc'[NoGo#0_Coef]'\
SC01922 24.6 Go HC BN_CtxEGNG_RespXCtx_SC01922_bucket+tlrc'[Go#0_Coef]'\
SC01922 24.6 NoGo HC BN_CtxEGNG_RespXCtx_SC01922_bucket+tlrc'[NoGo#0_Coef]'\
SC01923 24.0 Go HC BN_CtxEGNG_RespXCtx_SC01923_bucket+tlrc'[Go#0_Coef]'\
SC01923 24.0 NoGo HC BN_CtxEGNG_RespXCtx_SC01923_bucket+tlrc'[NoGo#0_Coef]'\
SC01928 24.0 Go HC BN_CtxEGNG_RespXCtx_SC01928_bucket+tlrc'[Go#0_Coef]'\
SC01928 24.0 NoGo HC BN_CtxEGNG_RespXCtx_SC01928_bucket+tlrc'[NoGo#0_Coef]'\
SC01943 24.6 Go HC BN_CtxEGNG_RespXCtx_SC01943_bucket+tlrc'[Go#0_Coef]'\
SC01943 24.6 NoGo HC BN_CtxEGNG_RespXCtx_SC01943_bucket+tlrc'[NoGo#0_Coef]'\
SC01953 23.3 Go HC BN_CtxEGNG_RespXCtx_SC01953_bucket+tlrc'[Go#0_Coef]'\
SC01953 23.3 NoGo HC BN_CtxEGNG_RespXCtx_SC01953_bucket+tlrc'[NoGo#0_Coef]'\
SC01958 25.1 Go HC BN_CtxEGNG_RespXCtx_SC01958_bucket+tlrc'[Go#0_Coef]'\
SC01958 25.1 NoGo HC BN_CtxEGNG_RespXCtx_SC01958_bucket+tlrc'[NoGo#0_Coef]'\
SC01959 24.5 Go HC BN_CtxEGNG_RespXCtx_SC01959_bucket+tlrc'[Go#0_Coef]'\
SC01959 24.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01959_bucket+tlrc'[NoGo#0_Coef]'
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Subject Author Posted

3dLME dataTable Error

3dFoodie August 20, 2015 01:27PM

Re: 3dLME dataTable Error

gang August 20, 2015 01:33PM

Re: 3dLME dataTable Error

3dFoodie August 20, 2015 02:39PM

Re: 3dLME dataTable Error

gang August 20, 2015 03:57PM

Re: 3dLME dataTable Error

3dFoodie August 24, 2015 11:20AM