AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
August 31, 2015 02:21PM
Hello,

I have recently installed the afni package from neurodebian for our lab.
** AFNI version = AFNI_2011_12_21_1014 Compile date = Dec 26 2014
** [[Precompiled binary =Debian-i686-1-gnu: Dec 26 2014]]

The installation speed was tested with the following command on the local computer:

suma -i ld120

and the speed is at about 40 displays/second

When running the same command remotely by ssh (over university high speed network) the speed is at around 0.25 displays/second from one sample remote machine while on another machine we get the following error (see below):

My questions are:

Are these slow speed to be expected when connecting remotely?
Does anyone have suggestions as to possible solutions to improve speed?
Any ideas on the meaning of the error below?

Thank you



*******************************************************


Xlib: extension "NV-GLX" missing on display "oliver:11.0".

vvvvvvvvvvvvvvvvvvvvvvvvvvvvSurface #1/1(Local Domain Parent), loading ...
oo Warning suma (/tmp/buildd/afni-0.20141224~dfsg.1/SUMA/SUMA_suma.c:1174):

No sumarc file found. You should create one by running the following:

suma -update_env

I also recommend you run 'suma -update_env' whenever you update AFNI.

See details for -environment and -update_env options in suma -help's output.


oo Warning SUMA_XErrHandler (/tmp/buildd/afni-0.20141224~dfsg.1/SUMA/SUMA_display.c:4111):
Intercepted X11 error: GLXBadRenderRequest
Will attempt to proceed but trouble might ensue.
++ Notice SUMA_XErrHandler (/tmp/buildd/afni-0.20141224~dfsg.1/SUMA/SUMA_display.c:4112 @14:03:58):
Trace At Xerr
SUMA_XErrHandler
SUMA_DrawMesh
SUMA_display_one
SUMA_display
SUMA_handleRedisplay
suma
Bottom of Debug Stack
oo Warning SUMA_XErrHandler (/tmp/buildd/afni-0.20141224~dfsg.1/SUMA/SUMA_display.c:4111):
Intercepted X11 error: GLXBadLargeRequest
Will attempt to proceed but trouble might ensue.
++ Notice SUMA_XErrHandler (/tmp/buildd/afni-0.20141224~dfsg.1/SUMA/SUMA_display.c:4112 @14:03:58):
Trace At Xerr
*******************************************************
Subject Author Posted

Running afni and suma remotely

mbouffard August 31, 2015 02:21PM

Re: Running afni and suma remotely

Daniel Glen August 31, 2015 05:05PM

Re: Running afni and suma remotely

rick reynolds September 01, 2015 09:16AM

Re: Running afni and suma remotely

mbouffard September 01, 2015 11:36AM