AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

Previous Message Next Message
Message List New Topic Print View
|
AjaySK
November 30, 2015 01:51PM
Hi Rick,
Just thought I'd follow up with my previous questions:

1) Mapsaiconahedron uses affine warping?

2) In looking at the SUMA_AligntoExperiement command it uses 3dWarpDrive and 3dAllineate for warping my native brain surface to MNI. Do you see any issues if I replaced these command lines with nonlinear afni tools (ie 3dQwarp) to perform the nonlinear warp instead or is this not valid for surface based analyses?

3) Are all surface tools such as SurftoSurf and 3dVol2surf affine transforms (assume so based on your previous responses), and if so are there any tools external to AFNI that use nonlinear that you are aware of?

Thanks,
Ajay
Reply Quote
RSS
Subject Author Posted

Using own MNI

kaseybrink November 12, 2015 03:55PM

Re: Using own MNI with SUMA

AjaySK November 16, 2015 04:12PM

Re: Using own MNI with SUMA

Peter Molfese November 17, 2015 11:08AM

Re: Using own MNI

rick reynolds November 17, 2015 01:25PM

Re: Using own MNI

AjaySK November 17, 2015 04:20PM

Re: Using own MNI

kaseybrink November 19, 2015 11:29AM

Re: Using own MNI

Peter Molfese November 19, 2015 02:13PM

Re: Using own MNI

AjaySK November 19, 2015 05:03PM

Re: Using own MNI

rick reynolds November 20, 2015 12:43PM

Re: Using own MNI

AjaySK November 25, 2015 04:49PM

Re: Using own MNI

AjaySK November 30, 2015 01:51PM

Re: Using own MNI

rick reynolds November 30, 2015 04:29PM

Re: Using own MNI

Peter Molfese November 30, 2015 04:39PM

Re: Using own MNI

AjaySK December 01, 2015 01:33AM

Re: Using own MNI

Peter Molfese December 01, 2015 07:27AM

Re: Using own MNI

AjaySK December 01, 2015 01:29AM

Re: Using own MNI

rick reynolds December 01, 2015 12:52PM

Re: Using own MNI

AjaySK December 02, 2015 02:51AM

Re: Using own MNI

Peter Molfese December 02, 2015 11:28AM