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Re: Oblique and alignment issue

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hsampath
August 15, 2012 04:14PM
Hello Daniel,

Thanks for your help. As you suggested, I ran "align_epi_anat.py -anat anat-dset -epi epi-dset -epi_base 3 -deoblique on" command. Now, the alignment issue is resolved. but when i overlaid the epi in afni, the oblique warning message popped up. 3dinfo on the aligned anatomy still shows that the data is oblique. Why is it so?

Thanks
Hema
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Subject Author Posted

Oblique and alignment issue

hsampath August 15, 2012 03:46PM

Re: Oblique and alignment issue

Daniel Glen August 15, 2012 03:53PM

Re: Oblique and alignment issue

hsampath August 15, 2012 04:14PM

Re: Oblique and alignment issue

mbalth August 20, 2012 05:32PM

Re: Oblique and alignment issue

Daniel Glen August 20, 2012 05:44PM

Re: Oblique and alignment issue

mbalth August 20, 2012 08:20PM



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