Skip to content

AFNI/NIfTI Server

Sections
Personal tools
You are here: Home » AFNI » Community » Message Board

History of AFNI updates   Suggested reading for beginners   Add yourself to the AFNI map!

 New Topic  |  Go to Top  |  Go to Topic  |  Search   Previous Message  |  Next Message 
 Re: 3dDeconvolve malloc error
Author: Daniel Glen (---.nimh.nih.gov)
Date:   10-30-09 16:44

One memory saving strategy is to reduce the size of the input datasets. This could be done by processing a single slice at a time with 3dZcutup and then 3dZcat to put the slices of 3dDeconvolve output all back together again. Often it is more convenient to take limit the box of the input dataset to a smaller dataset with 3dAutobox. Here is an example:

3dAutomask -dilate 2 -prefix dset_am dset+orig
3dAutobox -noclust -prefix dset_am_ab dset_am+orig
3dZeropad -master dset_am_ab+orig -prefix dset_ab dset+orig

 Reply To This Message  |  Flat View   Newer Topic  |  Older Topic 

 Topics Author  Date
 3dDeconvolve malloc error  new
Iain DeWitt 10-30-09 14:17 
 Re: 3dDeconvolve malloc error  
bob cox 10-30-09 16:03 
 Re: 3dDeconvolve malloc error  
Daniel Glen 10-30-09 16:44 
 Re: 3dDeconvolve malloc error  
Iain DeWitt 10-30-09 17:55 


 New Topic  |  Go to Top  |  Go to Topic  |  Search 
 Reply To This Message
 Your Name:
 Your E-mail:
 Subject:
 Attachment:
 Attachment:
   

Powered by Plone

phorum.org

This site conforms to the following standards: