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  • AFNI, SUMA and FATCAT: v16.0.11 (doc v2.1) »

1. Installation and Background¶

  • 1.1. The Authoritative HowTo for Installing AFNI
    • 1.1.1. Overview
      • Preamble Ramble
      • Setting up systems
      • Optional reading: technical notes around installing
    • 1.1.2. Complete system setup for: (current) Linux
    • 1.1.3. Complete system setup for: (modern) Mac OS
    • 1.1.4. FAQ and debugging common error messages
  • 1.2. Downloading AFNI/SUMA software
    • 1.2.1. Overview
    • 1.2.2. Choosing an AFNI that’s right for you
      • A. Updating existing AFNI binaries to the newest version (Linux/Unix or Mac)
      • B. Downloading a set of the newest precompiled AFNI binaries
      • C. Downloading the newest AFNI source code
      • D. Browsing all AFNI packages (and atlases)
  • 1.3. Unix Tutorial
    • 1.3.1. Setup Pages
      • 1. What is ... ? Unix, tcsh and AFNI
      • 2. Opening a Terminal
      • 3. Installing AFNI (software)
      • 4. Installing AFNI_data6 (sample class data)
    • 1.3.2. Basic Unix Tutorial
      • 1. Basic Unix : setup
      • 2. Basic Unix : basic commands
      • 3. Basic Unix : bg and fg processes
      • 4. Basic Unix : light intro to shell scripts
      • 5. Basic Unix : special characters
      • 6. Basic Unix : shell variables
    • 1.3.3. Unix commands
      • 1. Unix and shell commands
      • 2. Error messages
  • 1.4. Basic Bootcamp Prep

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Table Of Contents

  • 1. Installation and Background
    • 1.1. The Authoritative HowTo for Installing AFNI
    • 1.2. Downloading AFNI/SUMA software
    • 1.3. Unix Tutorial
    • 1.4. Basic Bootcamp Prep
  • 2. SUMA
  • 3. FATCAT
  • 4. Statistics
  • 5. Tutorials, Demos
  • 6. Demo Material
  • 7. Each program’s “Help”
  • 8. Glossary
  • 9. References

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