@DTI_studio_reposition <DTI_Studio_volume> <AFNI_reference_volume> This script reslices and repositions a DTI Studio Analyze format volume to match an AFNI volume used as input data for DTI Studio. Check realignment with AFNI to be sure all went well.
Example: Fibers.hdr is an Analyze volume from DTI Studio that contains
fiber tract volume data. The Analyze format data will have two files - Fibers.hdr with the header data and Fibers.img with the data DTI Studio allows saving the fibers as volumes in the Fiber panel, disk icon in the lower right
FA+orig is an AFNI volume to which to match the Analyze volume To create an AFNI brick version of Fibers that is in alignment
with FA+orig (output is Fibers+orig):
@DTI_studio_reposition Fibers.hdr FA+orig
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