This program is intended to be helpful for figuring out AFNI installation issues. This is just a start.
examples
- afni_system_check.py -check_all
2a. afni_system_check.py -find_prog python 2b. afni_system_check.py -find_prog python -exact yes
-help : show this help
-hist : show program history
-show_valid_opts : show valid options for program
-todo : show current todo list
-ver : show current version
NOTE: either a terminal or an action option is required
action options:
- -check_all\ : perform all system checks
- see section, “details displayed via -check_all”
-data_root DDIR : search for class data under DDIR -find_prog PROG : search PATH for PROG
- default is PROG, case-insensitive
- see also -casematch, -exact
other options:
-casematch yes/no : match case in -find_prog
-exact yes/no : search for PROG without wildcards in -find_prog
- general information:
- CPU, operating system and version, # CPUs, login shell
- AFNI and related tests:
- which afni, python, R and tcsh, along with versions
- check for multiple afni packages in PATH
- check that various AFNI programs run
- python libs:
- check that various python libraries are found and loaded
- path vars:
- show some environment variables related to the PATH
Enter search terms or a module, class or function name.