++ 3dAFNItoNIFTI: AFNI version=AFNI_2011_12_21_1014 (Dec 16 2015) [64-bit] Usage: 3dAFNItoNIFTI [options] dataset Reads an AFNI dataset, writes it out as a NIfTI-1.1 file.
NOTES: * The nifti_tool program can be used to manipulate
the contents of a NIfTI-1.1 file.
that AFNI can read directly (e.g., MINC-1).
can directly read .nii files. If you wish to make such a conversion anyway, one way to do so is like so:
3dcalc -a ppp.nii -prefix ppp -expr ‘a’
Default: the dataset’s prefix is used.
- -verb = Be verbose = print progress messages.
- Repeating this increases the verbosity (maximum setting is 3 ‘-verb’ options).
- -float = Force the output dataset to be 32-bit
- floats. This option should be used when the input AFNI dataset has different float scale factors for different sub-bricks, an option that NIfTI-1.1 does not support.
The following options affect the contents of the AFNI extension field that is written by default into the NIfTI-1.1 header:
- -pure = Do NOT write an AFNI extension field into
- the output file. Only use this option if needed. You can also use the ‘nifti_tool’ program to strip extensions from a file.
- -denote = When writing the AFNI extension field, remove
- text notes that might contain subject identifying information.
- -oldid = Give the new dataset the input dataset’s
- AFNI ID code.
- -newid = Give the new dataset a new AFNI ID code, to
distinguish it from the input dataset.**** N.B.: -newid is now the default action.
++ Compile date = Dec 16 2015