7.1.284. @SUMA_FSvolToBRIKΒΆ

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Usage: @SUMA_FSvolToBRIK <FSvoldata> <Prefix> A script to convert COR- or .mgz files from FreeSurfer.

DO NOT use this script for general purpose .mgz conversions Use mri_convert instead.
Example 1: Taking COR- images in mri/orig to BRIK volume
@SUMA_FSvolToBRIK mri/orig test/cor_afni
Example 2: Taking .mgz volume to BRIK volume
@SUMA_FSvolToBRIK mri/aseg.mgz test/aseg_afni

To view segmented volumes in AFNI, use the FreeSurfer color scale by doing:

Define Overlay –> Pos? (on) Choose continuous (**) colorscale Right Click on colorscale –> Choose Colorscale Select FreeSurfer_Seg_255 Set Range to 255

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