7.1.33. 3dAFNItoMINCΒΆ

Link to classic view

Usage: 3dAFNItoMINC [options] dataset Reads in an AFNI dataset, and writes it out as a MINC file.

OPTIONS:

-prefix ppp = Write result into file ppp.mnc;
default prefix is same as AFNI dataset’s.
-floatize = Write MINC file in float format.
-swap = Swap bytes when passing data to rawtominc

NOTES: * Multi-brick datasets are written as 4D (x,y,z,t) MINC

files.
  • If the dataset has complex-valued sub-bricks, then this

    program won’t write the MINC file.

  • If any of the sub-bricks have floating point scale

    factors attached, then the output will be in float format (regardless of the presence of -floatize).

  • This program uses the MNI program ‘rawtominc’ to create

    the MINC file; rawtominc must be in your path. If you don’t have rawtominc, you must install the MINC tools software package from MNI. (But if you don’t have the MINC tools already, why do you want to convert to MINC format anyway?)

  • At this time, you can find the MINC tools at

    You need the latest version of minc-.tar.gz and also of netcdf-.tar.gz.

– RWCox - April 2002

++ Compile date = Dec 16 2015

Table Of Contents

This Page