AFNI HISTORY

The levels of importance go from 1 to 5, with meanings:
       1 - users would not care
       2 - of little importance, though some users might care
       3 - fairly important
       4 - a big change or new program
       5 - IMPORTANT: we expect users to know

generated via the command : afni_history -html -reverse -min_level 3 -past_years 1 

  ----  log of AFNI updates (most recent first)  ----

14 Mar 2013, P Taylor, 3dNetCorr, level 4 (SUPER), type 1 (NEW_PROG)
    New function: calculate correlat/Z of ROIs in a network.

    This program works on several networks as separate subbricks simultan-
    eously.


22 Feb 2013, ZS Saad, suma, level 3 (MAJOR), type 2 (NEW_OPT)
    Prying hemispheres apart to see medial or lateral sides simultaneously

    This is controlled via the ctrl+Button 1-Motion. See SUMA's ctrl+h output
    for details. The prying behaviour is different for spheres and flat maps
    Just try it and see. ctrl+double click to get back to initial view.
    See also env: SUMA_LHunify

22 Feb 2013, ZS Saad, suma, level 3 (MAJOR), type 2 (NEW_OPT)
    Automatically adjust position of LR surfaces so that they don't overlap

    This is only done for anatomically incorrect surfaces, the others should
    not overlap of course. This allows for simultaneous viewing of inflated
    surfaces and flattened ones side by side.


14 Feb 2013, ZS Saad, suma, level 3 (MAJOR), type 2 (NEW_OPT)
    Added stippling-based transparency to surface viewing.

    Fancier blending-based transparency will have to wait.

14 Feb 2013, ZS Saad, @SUMA_Make_Spec_FS, level 3 (MAJOR), type 2 (NEW_OPT)
    Option -nocor to improve data import from FreeSurfer

    Option avoid COR images, produces NIFTI and GIFTI output that
    aligns with the initial volume passed to FreeSurfer. This required
    considerable changes to the script and will not be the default for
    a while longer.


13 Feb 2013, RC Reynolds, unix_tutorial, level 3 (MAJOR), type 1 (NEW_PROG)
    added tutorial to CVS tree, with processed files under AFNI_data6


19 Oct 2012, G Chen, 3dMVM, level 3 (MAJOR), type 1 (NEW_PROG)
    Multivariate modeling approach to group analysis

    This is an R program that performs conventional ANOVA or 
    ANCOVA-type analysis with no limit on the number of variables. 
    See more details at http://afni.nimh.nih.gov/sscc/gangc/MVM.html


24 Aug 2012, ZS Saad, suma, level 3 (MAJOR), type 2 (NEW_OPT)
    Added interactive clustering to surface controller

    The state of affairs:
      -Clustering tables are only output to the terminal 
         and the log window.
      -Clustering is yoked between hemispheres
      -Can control connectivity radius and min area or min nodes
      -When you click on a node inside a cluster, the node in that
         cluster with the highest value is highlighted with a black
         sphere.

24 Aug 2012, RC Reynolds, column_cat, level 3 (MAJOR), type 1 (NEW_PROG)
    like 'cat', except horizontally (see recent Unix command, 'paste')


19 Jul 2012, ZS Saad, suma, level 3 (MAJOR), type 2 (NEW_OPT)
    Allow for L/R hemi yoking for many operations

    These include:Threshold setting. I,T,B sub-brick selection. Range 
    setting. Dset loading. Cmap changing. Dset switching.
    Order changing.


23 May 2012, DR Glen, 3dinfo, @auto_tlrc, level 3 (MAJOR), type 4 (BUG_FIX)
    Generic space handling corrected for TT_N27 and other spaces

    @auto_tlrc would crash with improper generic spaces
    Generic space restricted to AFNI view names (orig, acpc, tlrc)