AFNI program: 3dBRAIN_VOYAGERtoAFNI
Output of -help
Usage: 3dBRAIN_VOYAGERtoAFNI <-input BV_VOLUME.vmr>
[-bs] [-qx] [-tlrc|-acpc|-orig] [<-prefix PREFIX>]
Converts a BrainVoyager vmr dataset to AFNI's BRIK format
The conversion is based on information from BrainVoyager's
website: www.brainvoyager.com.
Sample data and information provided by
Adam Greenberg and Nikolaus Kriegeskorte.
If you get error messages about the number of
voxels and file size, try the options below.
I hope to automate these options once I have
a better description of the BrainVoyager QX format.
Optional Parameters:
-bs: Force byte swapping.
-qx: .vmr file is from BrainVoyager QX
-tlrc: dset in tlrc space
-acpc: dset in acpc-aligned space
-orig: dset in orig space
If unspecified, the program attempts to guess the view from
the name of the input.
[-novolreg|-noxform]: Ignore any Rotate, Volreg, Tagalign,
or WarpDrive transformations present in
the Surface Volume.
Common Debugging Options:
[-trace]: Turns on In/Out debug and Memory tracing.
For speeding up the tracing log, I recommend
you redirect stdout to a file when using this option.
For example, if you were running suma you would use:
suma -spec lh.spec -sv ... > TraceFile
This option replaces the old -iodbg and -memdbg.
[-TRACE]: Turns on extreme tracing.
[-nomall]: Turn off memory tracing.
[-yesmall]: Turn on memory tracing (default).
NOTE: For programs that output results to stdout
(that is to your shell/screen), the debugging info
might get mixed up with your results.
++ SUMA version 2006_7_3
CVS tag:
SUMA_2005_04_29_1733
Compile Date:
Jul 18 2008
Ziad S. Saad SSCC/NIMH/NIH saadz@mail.nih.gov
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Sat Jul 19 01:51:44 EDT 2008