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Sincerely, AFNI HQ

History of AFNI updates  

|
January 07, 2016 04:30AM
Dear all,

I am having trouble executing a 3dMVM command. The error massage is:

++++++++++++++++++++++++++++++++++++++++++++++++++++

Reading input files now...

Reading input files: Done!

If the program hangs here for more than, for example, half an hour,
kill the process because the model specification or the GLT coding
is likely inappropriate.

[1] "Great, test run passed at voxel (18, 32, 25)!"
[1] "Start to compute 50 slices along Z axis. You can monitor the progress"
[1] "and estimate the total run time as shown below."
[1] "01/07/16 17:01:05.701"
Error in if (p_wsmvt < uvfm$anova[ii, "Pr(>F)"]) out[ii] <- qf(p_wsmvt, :
argument is of length zero
Calls: aperm -> apply -> FUN
In addition: Warning message:
In summary.Anova.mlm(object$Anova, multivariate = FALSE) :
HF eps > 1 treated as 1
Execution halted



This is my script below:

3dMVM -prefix TM_MVM \
-jobs 1 \
-bsVars group \
-wsVars 'domain*interval' \
-wsE2 \
-num_glt 7 \
-gltLabel 1 nor_vs_ams -gltCode 1 'group : 1*normal -1*amusics' \
-gltLabel 2 nor -gltCode 2 'group : 1*normal' \
-gltLabel 3 ams -gltCode 3 'group : 1*amusics' \
-gltLabel 4 sp_vs_ms -gltCode 4 'domain : 1*speech -1*music' \
-gltLabel 5 sp -gltCode 5 'domain : 1*speech' \
-gltLabel 6 ms -gltCode 6 'domain : 1*music' \
-gltLabel 7 var_vs_fix_+_rep -gltCode 7 'interval : 1*varied -0.5*fixed -0.5*repeat' \
-dataTable \
Subj group domain interval InputFile \
F01 normal speech repeat ./data/stats.TM_F01_REML+tlrc'[1]' \
F01 normal speech fixed ./data/stats.TM_F01_REML+tlrc'[4]' \
F01 normal speech varied ./data/stats.TM_F01_REML+tlrc'[7]' \
F01 normal music repeat ./data/stats.TM_F01_REML+tlrc'[10]' \
F01 normal music fixed ./data/stats.TM_F01_REML+tlrc'[13]' \
F01 normal music varied ./data/stats.TM_F01_REML+tlrc'[16]' \
F02 normal speech repeat ./data/stats.TM_F02_REML+tlrc'[1]' \
F02 normal speech fixed ./data/stats.TM_F02_REML+tlrc'[4]' \
F02 normal speech varied ./data/stats.TM_F02_REML+tlrc'[7]' \
F02 normal music repeat ./data/stats.TM_F02_REML+tlrc'[10]' \
F02 normal music fixed ./data/stats.TM_F02_REML+tlrc'[13]' \
F02 normal music varied ./data/stats.TM_F02_REML+tlrc'[16]' \
F03 normal speech repeat ./data/stats.TM_F03_REML+tlrc'[1]' \
F03 normal speech fixed ./data/stats.TM_F03_REML+tlrc'[4]' \
F03 normal speech varied ./data/stats.TM_F03_REML+tlrc'[7]' \
F03 normal music repeat ./data/stats.TM_F03_REML+tlrc'[10]' \
F03 normal music fixed ./data/stats.TM_F03_REML+tlrc'[13]' \
F03 normal music varied ./data/stats.TM_F03_REML+tlrc'[16]' \
F04 normal speech repeat ./data/stats.TM_F04_REML+tlrc'[1]' \
F04 normal speech fixed ./data/stats.TM_F04_REML+tlrc'[4]' \
F04 normal speech varied ./data/stats.TM_F04_REML+tlrc'[7]' \
F04 normal music repeat ./data/stats.TM_F04_REML+tlrc'[10]' \
F04 normal music fixed ./data/stats.TM_F04_REML+tlrc'[13]' \
F04 normal music varied ./data/stats.TM_F04_REML+tlrc'[16]' \
F05 normal speech repeat ./data/stats.TM_F05_REML+tlrc'[1]' \
F05 normal speech fixed ./data/stats.TM_F05_REML+tlrc'[4]' \
F05 normal speech varied ./data/stats.TM_F05_REML+tlrc'[7]' \
F05 normal music repeat ./data/stats.TM_F05_REML+tlrc'[10]' \
F05 normal music fixed ./data/stats.TM_F05_REML+tlrc'[13]' \
F05 normal music varied ./data/stats.TM_F05_REML+tlrc'[16]' \
M01 normal speech repeat ./data/stats.TM_M01_REML+tlrc'[1]' \
M01 normal speech fixed ./data/stats.TM_M01_REML+tlrc'[4]' \
M01 normal speech varied ./data/stats.TM_M01_REML+tlrc'[7]' \
M01 normal music repeat ./data/stats.TM_M01_REML+tlrc'[10]' \
M01 normal music fixed ./data/stats.TM_M01_REML+tlrc'[13]' \
M01 normal music varied ./data/stats.TM_M01_REML+tlrc'[16]' \
M03 normal speech repeat ./data/stats.TM_M03_REML+tlrc'[1]' \
M03 normal speech fixed ./data/stats.TM_M03_REML+tlrc'[4]' \
M03 normal speech varied ./data/stats.TM_M03_REML+tlrc'[7]' \
M03 normal music repeat ./data/stats.TM_M03_REML+tlrc'[10]' \
M03 normal music fixed ./data/stats.TM_M03_REML+tlrc'[13]' \
M03 normal music varied ./data/stats.TM_M03_REML+tlrc'[16]' \
M04 normal speech repeat ./data/stats.TM_M04_REML+tlrc'[1]' \
M04 normal speech fixed ./data/stats.TM_M04_REML+tlrc'[4]' \
M04 normal speech varied ./data/stats.TM_M04_REML+tlrc'[7]' \
M04 normal music repeat ./data/stats.TM_M04_REML+tlrc'[10]' \
M04 normal music fixed ./data/stats.TM_M04_REML+tlrc'[13]' \
M04 normal music varied ./data/stats.TM_M04_REML+tlrc'[16]' \
A_F01 amusics speech repeat ./data/stats.TM_A_F01_REML+tlrc'[1]' \
A_F01 amusics speech fixed ./data/stats.TM_A_F01_REML+tlrc'[4]' \
A_F01 amusics speech varied ./data/stats.TM_A_F01_REML+tlrc'[7]' \
A_F01 amusics music repeat ./data/stats.TM_A_F01_REML+tlrc'[10]' \
A_F01 amusics music fixed ./data/stats.TM_A_F01_REML+tlrc'[13]' \
A_F01 amusics music varied ./data/stats.TM_A_F01_REML+tlrc'[16]' \
A_F02 amusics speech repeat ./data/stats.TM_A_F02_REML+tlrc'[1]' \
A_F02 amusics speech fixed ./data/stats.TM_A_F02_REML+tlrc'[4]' \
A_F02 amusics speech varied ./data/stats.TM_A_F02_REML+tlrc'[7]' \
A_F02 amusics music repeat ./data/stats.TM_A_F02_REML+tlrc'[10]' \
A_F02 amusics music fixed ./data/stats.TM_A_F02_REML+tlrc'[13]' \
A_F02 amusics music varied ./data/stats.TM_A_F02_REML+tlrc'[16]' \
A_F03 amusics speech repeat ./data/stats.TM_A_F03_REML+tlrc'[1]' \
A_F03 amusics speech fixed ./data/stats.TM_A_F03_REML+tlrc'[4]' \
A_F03 amusics speech varied ./data/stats.TM_A_F03_REML+tlrc'[7]' \
A_F03 amusics music repeat ./data/stats.TM_A_F03_REML+tlrc'[10]' \
A_F03 amusics music fixed ./data/stats.TM_A_F03_REML+tlrc'[13]' \
A_F03 amusics music varied ./data/stats.TM_A_F03_REML+tlrc'[16]' \
A_F04 amusics speech repeat ./data/stats.TM_A_F04_REML+tlrc'[1]' \
A_F04 amusics speech fixed ./data/stats.TM_A_F04_REML+tlrc'[4]' \
A_F04 amusics speech varied ./data/stats.TM_A_F04_REML+tlrc'[7]' \
A_F04 amusics music repeat ./data/stats.TM_A_F04_REML+tlrc'[10]' \
A_F04 amusics music fixed ./data/stats.TM_A_F04_REML+tlrc'[13]' \
A_F04 amusics music varied ./data/stats.TM_A_F04_REML+tlrc'[16]' \
A_M01 amusics speech repeat ./data/stats.TM_A_M01_REML+tlrc'[1]' \
A_M01 amusics speech fixed ./data/stats.TM_A_M01_REML+tlrc'[4]' \
A_M01 amusics speech varied ./data/stats.TM_A_M01_REML+tlrc'[7]' \
A_M01 amusics music repeat ./data/stats.TM_A_M01_REML+tlrc'[10]' \
A_M01 amusics music fixed ./data/stats.TM_A_M01_REML+tlrc'[13]' \
A_M01 amusics music varied ./data/stats.TM_A_M01_REML+tlrc'[16]' \
A_M02 amusics speech repeat ./data/stats.TM_A_M02_REML+tlrc'[1]' \
A_M02 amusics speech fixed ./data/stats.TM_A_M02_REML+tlrc'[4]' \
A_M02 amusics speech varied ./data/stats.TM_A_M02_REML+tlrc'[7]' \
A_M02 amusics music repeat ./data/stats.TM_A_M02_REML+tlrc'[10]' \
A_M02 amusics music fixed ./data/stats.TM_A_M02_REML+tlrc'[13]' \
A_M02 amusics music varied ./data/stats.TM_A_M02_REML+tlrc'[16]' \
A_M04 amusics speech repeat ./data/stats.TM_A_M04_REML+tlrc'[1]' \
A_M04 amusics speech fixed ./data/stats.TM_A_M04_REML+tlrc'[4]' \
A_M04 amusics speech varied ./data/stats.TM_A_M04_REML+tlrc'[7]' \
A_M04 amusics music repeat ./data/stats.TM_A_M04_REML+tlrc'[10]' \
A_M04 amusics music fixed ./data/stats.TM_A_M04_REML+tlrc'[13]' \
A_M04 amusics music varied ./data/stats.TM_A_M04_REML+tlrc'[16]'
Subject Author Posted

3dMVM errors

jojowang January 07, 2016 04:30AM

Re: 3dMVM errors

gang January 07, 2016 09:23AM

Re: 3dMVM errors

jojowang January 11, 2016 12:30AM

Re: 3dMVM errors

emarler May 29, 2020 12:39PM