AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 01, 2016 04:50PM
Hi,

I'm going through the examples from afni_proc.py to do resting state processing using afni_proc.py

The freesurfer note makes reference to aparc.a2009s+aseg but the example 3dcalc command then goes on to refer specifically to aparc+aseg.nii. My understanding of these different parcellations is that the come from different atlases. So my questions then is do the series of ROI numbers in the 3dcalc command refer to the aparc+aseg.nii or aparc.a2009s+aseg parcellations? Is the mention of aparc+aseg.nii in the 3dcalc command a typo given that aparc.a2009s+aseg is mentioned in the surrounding Freesurfer note documentation?

Thanks,

Colm.
Subject Author Posted

typo in freesurfer note in afni_proc.py?

Colm Connolly February 01, 2016 04:50PM

Re: typo in freesurfer note in afni_proc.py?

Colm Connolly February 01, 2016 08:50PM

Re: typo in freesurfer note in afni_proc.py?

rick reynolds February 01, 2016 09:17PM

Re: typo in freesurfer note in afni_proc.py?

rick reynolds February 01, 2016 09:15PM

Re: typo in freesurfer note in afni_proc.py?

Colm Connolly February 02, 2016 01:07PM

Re: typo in freesurfer note in afni_proc.py?

rick reynolds February 02, 2016 04:00PM

Re: typo in freesurfer note in afni_proc.py?

Colm Connolly February 03, 2016 02:03PM