And a note for users with TORTOISE <2.5.2 (which is all of us at the moment). If you want/need to make an AFNI-format bmatrix (e.g., called BMTXT_AFNI.txt) from the present TORTOISE output (BMTXT.txt), you can do the following 2 step process:
1dDW_Grad_o_Mat \
-in_bmatA_cols BMTXT.txt \
-out_grad_cols_bwt GRADS_BWT.dat \
-keep_b0s
1dDW_Grad_o_Mat \
-in_grad_cols_bwt GRADS_BWT.dat \
-out_bmatA_cols BMTXT_AFNI.txt \
-keep_b0s
which will also keep all b0s and DWIs.
--pt
Edited 1 time(s). Last edit at 06/15/2016 04:46PM by ptaylor.