AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 10, 2016 03:16PM
Conversed with Rick on this. You have lots of choices. For false discovery rate q-values, you can use "3dFDR -qval" to generate a q-value dataset that you can threshold directly. Alternatively, "fdrval -qinput" should return the statistical threshold you want. For family wise error correction, you will have to parse the output of 3dClustSim to get the uncorrected p-value. Then use cdf to find the value of the statistic in which you are interested. This is likely to be done only at a group level analysis, so I'm not sure how much awking and greping is needed.
Subject Author Posted

scripting Multiple Comparison Correction

justinvincentphd@gmail.com May 08, 2016 07:50PM

Re: scripting Multiple Comparison Correction

Daniel Glen May 10, 2016 03:16PM

Re: scripting Multiple Comparison Correction

Vicky Zhao October 24, 2016 02:19PM

Re: scripting Multiple Comparison Correction

Peter Molfese October 24, 2016 02:40PM