AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
July 21, 2016 12:08PM
Hello,

Thanks for your helpful reply.

++ Using Mac OS 10.7.5 afni version AFNI_2011_12_21_1014

++ Checked the system, all is fine
$ afni_system_check.py -check_all

++Did the following:

install.packages("snow",dependencies=TRUE)
install.packages("nlme",dependencies=TRUE)
install.packages("contrast",dependencies=TRUE)
install.packages("fastICA",dependencies=TRUE)
install.packages("afex",dependencies=TRUE)
install.packages("phia",dependencies=TRUE)

However, R is still having warning messages regarding package 'car'
Error: package or namespace load failed for 'car'

When running my 3dMVM script, now model test failed for a few possible reasons, one being to make sure that R packages afex and phia have been installed. In R under Package Manager, afex and phia are not loaded and even clicking they wont load.

Using R version for snow leopard 3.2.1 GUI 1.66

Presume I need to get the latest version of R for these packages in order to run 3dMVM, but I assume this means I have to update my Mac OS system as well?
Subject Author Posted

R and 3dMVM

acquired.aphasia July 18, 2016 09:39AM

Re: R and 3dMVM

ptaylor July 18, 2016 11:43AM

Re: R and 3dMVM

acquired.aphasia July 21, 2016 12:08PM

Re: R and 3dMVM

gang July 21, 2016 02:50PM

Re: R and 3dMVM

acquired.aphasia July 22, 2016 09:21AM

Re: R and 3dMVM

ptaylor July 22, 2016 11:12AM