AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
July 25, 2016 01:20PM
Hi JDC,

Exactly how do you want to process the data? Since
the steps are not simultaneous, perhaps the goal is
to bandpass regressors of no interest with the data,
except that both -polort 3 and censoring are only
applied in 3dDeconvolve. It is difficult to separate
censoring from the regression.

If you want to put all of this together, I suggest
using Example 11 from the afni_proc.py help, maybe
with an additional -regress_bandpass option.

- rick
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Subject Author Posted

Filter data and nuisance variables before regression

jdc2004 July 23, 2016 11:18AM

Re: Filter data and nuisance variables before regression

rick reynolds July 25, 2016 01:20PM