AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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August 11, 2016 05:41AM
Hi AFNI people!

I'm trying to uppdate the current version of AFNI running on our analysis servers (and my local computer) while connected to a network using a proxy for internet access. This have worked in the past but I can no longer get it to update! The same problem occurs on both analysis servers and my local computer. The proxy is fine since I can both use a browser and install packages from the terminal. For example, this installed Kate without problem in the same login session:

yum install kate

When connecting my local computer to the ordinary network I could update AFNI , which means that the servers are not down. The output below seems to suggest that the proxy is working as well:
"Connecting to proxy.hu.liu.se (proxy.hu.liu.se)|130.236.5.152|:9999... connected.
Proxy request sent, awaiting response... 200 OK"

Any thoughts? The version here does not seem up to date so I cannot do it the @update.afni.binaries -local way.

[admin@maul ~]$ tcsh /usr//@update.afni.binaries -package linux_openmp_64
-- have AFNI binaries under /usr/local/afni/abin
-- install dir: using existing /usr/local/afni/abin
-- attempting to install package linux_openmp_64 under
   install dir: /usr/local/afni/abin...
-- have install dir
nuking old temporary directory...
++ working in new temp dir, .tmp.install
++ getting install prog linux_openmp_64/@update.afni.binaries ...
--2016-08-11 11:30:36--  [afni.nimh.nih.gov]
Resolving proxy.hu.liu.se (proxy.hu.liu.se)... 130.236.5.152
Connecting to proxy.hu.liu.se (proxy.hu.liu.se)|130.236.5.152|:9999... connected.
Proxy request sent, awaiting response... 200 OK
Length: 32816 (32K) [text/plain]
Saving to: ‘@update.afni.binaries’

100%[===============================================================================================================================>] 32 816      --.-K/s   in 0,1s    

2016-08-11 11:30:36 (257 KB/s) - ‘@update.afni.binaries’ saved [32816/32816]

++ using updated @update.afni.binaries, instead...

++ running: tcsh tmp.@update.afni.binaries -no_recur -package linux_openmp_64
-- running tmp.@update.afni.binaries version 2.9, May 5, 2016
-- have AFNI binaries under /usr/local/afni/abin
-- install dir: using existing /usr/local/afni/abin
-- will download from [afni.nimh.nih.gov] via wget

-- attempting to install package linux_openmp_64 under
   install dir: /usr/local/afni/abin...
-- have install dir
deleting old temporary directory...
++ working in new temp dir, .tmp.install
-- skipping update of tmp.@update.afni.binaries
++ downloading test file: wget linux_openmp_64/afni ...
--2016-08-11 11:30:36--  [afni.nimh.nih.gov]
Resolving afni.nimh.nih.gov (afni.nimh.nih.gov)... 156.40.187.114, 2607:f220:419:4103::114
Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|156.40.187.114|:443... failed: Connection timed out.
Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|2607:f220:419:4103::114|:443... failed: Network is unreachable.
rm: cannot remove ‘afni’: No such file or directory

++ update needed, installing...

++ downloading full package: wget linux_openmp_64.tgz ...
--2016-08-11 11:32:45--  [afni.nimh.nih.gov]
Resolving afni.nimh.nih.gov (afni.nimh.nih.gov)... 156.40.187.114, 2607:f220:419:4103::114
Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|156.40.187.114|:443... failed: Connection timed out.
Connecting to afni.nimh.nih.gov (afni.nimh.nih.gov)|2607:f220:419:4103::114|:443... failed: Network is unreachable.
** failed to download package [afni.nimh.nih.gov]



Edited 1 time(s). Last edit at 08/11/2016 07:44AM by Robin.
Subject Author Posted

Problem with @update.afni.binaries using proxy connection

Robin August 11, 2016 05:41AM

Re: Problem with @update.afni.binaries using proxy connection

rick reynolds August 11, 2016 08:11AM

Re: Problem with @update.afni.binaries using proxy connection

Robin August 11, 2016 09:36AM

Re: Problem with @update.afni.binaries using proxy connection

rick reynolds August 11, 2016 01:37PM

Re: Problem with @update.afni.binaries using proxy connection

Robin August 15, 2016 03:44AM

Re: Problem with @update.afni.binaries using proxy connection

rick reynolds August 18, 2016 08:10AM

Re: Problem with @update.afni.binaries using proxy connection

Robin August 18, 2016 09:50AM

Re: Problem with @update.afni.binaries using proxy connection

rick reynolds August 23, 2016 11:50AM