AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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August 18, 2016 04:01PM
Hi Gang,

Thank you for your quick reply. I fixed my code:

3dMVM -prefix WholeBrain_MVM_Contrasts5 -jobs 12 \
—bsVars Weight \
-wsVars Reward \
-num_glt 3 \
-gltLabel 1 ‘weight_F_N’ -gltCode 1 ’Weight : 1*HW -1*OW Reward : 1*FA -1*NA’ \
-gltLabel 2 ‘weight_F_M’ -gltCode 2 ‘Weight : 1*HW -1*OW Reward : 1*FA -1*MA’ \
-gltLabel 3 ‘weight_M_N’ -gltCode 3 ‘Weight : 1*HW -1*OW Reward : 1*MA -1*NA’ \
-dataTable \
101 OW 10 F FA stats.101+tlrc'[1]' \
101 OW 10 F MA stats.101+tlrc'[4]' \
101 OW 10 F NA stats.101+tlrc'[7]' \
102 OW 8 M FA stats.102+tlrc'[1]' \
102 OW 8 M MA stats.102+tlrc'[4]' \
102 OW 8 M NA stats.102+tlrc'[7]' \
103 HW 7 F FA stats.103+tlrc'[1]' \
103 HW 7 F MA stats.103+tlrc'[4]' \
103 HW 7 F NA stats.103+tlrc'[7]' \
....

Your suggestion to use file_tool -test -infile myfile was helpful. However, the only thing that I found is that I have bad '\' and no matter how I try to fix my '\' it still gives me errors. If I use: file_tool -show_bad_backslash -infile myfile.txt -prefix FIXED.txt, this creates a problem as when I try to run the "FIXED.txt", it says 3dMVM : No match. Pasting this script with the corrected or fixed '\' (they look exactly the same, into another document creates the same problem.
Subject Author Posted

3dmvm -data table not rectangular

shanaadise August 18, 2016 02:47PM

Re: 3dmvm -data table not rectangular

gang August 18, 2016 03:11PM

Re: 3dmvm -data table not rectangular

shanaadise August 18, 2016 04:01PM