AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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August 31, 2016 02:31PM
Hello,

I will preface by apologizing for the silly question....

My general pipeline uses the align_epi_anat.py script, however, I have 2 animals where the original EPI and anatomical images have better alignment than the output from the align_epi_anat script. Is it necessary to perform alignment between those images prior to registering to a template if it doesn't align as well as the originals do?

Thanks in advance,

Sharyn
Subject Author Posted

alignment

sharyn August 31, 2016 02:31PM

Re: alignment

Daniel Glen August 31, 2016 06:16PM

Re: alignment

sharyn September 02, 2016 12:27PM

Re: alignment

Daniel Glen September 02, 2016 04:32PM

Re: alignment

Daniel Glen September 09, 2016 05:25PM