AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 14, 2016 03:55PM
Hi BFair,

What shell are you using, and is the script really
specific to that shell? It is possible that you
could try with with either bash or tcsh, if it is
generic, and maybe the other would work.

Alternatively, IF all of the datasets can be listed
with a single wildcard, even if there are 2 groups
and 2 wildcard listings, and IF you are not using
covariates (in which case, the subject IDs are not
needed in the command), the datasets could be listed
on the command line with quoted wildcards, as in:

3dttest++ -setA '/PATH_TO_DATA/spmstatsintra/*/SessionB/EPI_short_MID/swea/con_0010.nii' \
          -setB '/PATH_TO_DATA/spmstatsintra/*/SessionC/EPI_short_MID/swea/con_0010.nii' \
          ...

Is that an option?

- rick
Subject Author Posted

3dttest++: Argument list too long

bfair September 14, 2016 01:39PM

Re: 3dttest++: Argument list too long

rick reynolds September 14, 2016 03:55PM

Re: 3dttest++: Argument list too long

rick reynolds September 16, 2016 08:37PM

Re: 3dttest++: Argument list too long

bfair September 21, 2016 02:08PM

Re: 3dttest++: Argument list too long

bfair December 08, 2016 10:52AM

Re: 3dttest++: Argument list too long

bfair December 08, 2016 12:22PM

Re: 3dttest++: Argument list too long

Bob Cox December 08, 2016 01:03PM