AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
September 22, 2016 02:25PM
Hi There...

I know it is a lot of data - it's still crashing... Would it work if I resample each 3D output and then concatenate? Do you think that will help before I go through all of these?


[rossisl@nialbn-01878557 newborn_neurons]$ free -h
total used free shared buffers cached
Mem: 125G 44G 81G 656K 358M 42G
-/+ buffers/cache: 1.6G 124G
Swap: 4.0G 0B 4.0G


[rossisl@nialbn-01878557 newborn_neurons]$ 3dZcat -prefix Aged_100_107 Aged_10[0-7]+orig.HEAD
++ 3dZcat: AFNI version=AFNI_16.2.18 (Sep 19 2016) [64-bit]

Fatal Signal 11 (SIGSEGV) received
3dZcat main
Bottom of Debug Stack
** Command line was:
3dZcat -prefix Aged_100_107 Aged_100+orig.HEAD Aged_101+orig.HEAD Aged_102+orig.HEAD Aged_103+orig.HEAD Aged_104+orig.HEAD Aged_105+orig.HEAD Aged_106+orig.HEAD Aged_107+orig.HEAD
** AFNI version = AFNI_16.2.18 Compile date = Sep 19 2016
** [[Precompiled binary linux_openmp_64: Sep 19 2016]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
** Crash log is appended to file /home/rossisl/.afni.crashlog

[

THANKS!
Subject Author Posted

to3d error

sharyn September 22, 2016 11:06AM

Re: to3d error

sharyn September 22, 2016 12:23PM

Re: to3d error

Daniel Glen September 22, 2016 01:04PM

Re: to3d error

rick reynolds September 22, 2016 01:35PM

Re: to3d error

sharyn September 22, 2016 02:25PM

Re: to3d error

rick reynolds September 22, 2016 04:06PM

Re: to3d error

sharyn September 22, 2016 04:48PM

Re: to3d error

rick reynolds September 22, 2016 08:41PM