AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
December 05, 2016 10:12AM
Many of those datasets had invalid NIFTI headers. So
worse than them being far enough off to require -giant_move
or maybe @Align_Centers, some might even be viewed as
left/right flipped.

So if alignment fails again, consider running @Align_Centers
on each dataset with the template as the -base dataset.

Also, consider expanding Peter's option to include a test
for being left/right flipped: 

-align_opts_aea -giant_move -check_flip

- rick
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Subject Author Posted

Analysing Openfmri data - Coregistration failure!

AlexBowring December 05, 2016 06:08AM

Re: Analysing Openfmri data - Coregistration failure!

Peter Molfese December 05, 2016 08:24AM

Re: Analysing Openfmri data - Coregistration failure!

rick reynolds December 05, 2016 10:12AM

Re: Analysing Openfmri data - Coregistration failure!

Daniel Glen December 12, 2016 04:32PM