AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
December 09, 2016 02:53PM
I am not sure what might be happening there,
since this works for me. What version of AFNI
are you running (afni -ver)?

And where is this script located
(which @SUMA_AlignToExperiment)?

Would you please run it via 'tcsh -x' and send
me the text output via email? So consider:

# (assuming $subj and $surface_dir are set)
mkdir rickr.test
cp anat_final.$subj+orig*  rickr.test
cd rickr.test

tcsh -x `which @SUMA_AlignToExperiment` \
   -exp_anat anat_final.$subj+orig \
   -surf_anat $surface_dir/101_SurfVol+orig \
   -wd -strip_skull surf_anat \
   -atlas_followers -overwrite_resp S \
   -prefix ${subj}_SurfVol_Alnd_Exp \
   |& tee out.a2e.txt

And then send me the out.a2e.txt file via email.

Thanks,

- rick
Subject Author Posted

@SUMA_AlignToExperiment Bug?

shanaadise December 08, 2016 07:55PM

Re: @SUMA_AlignToExperiment Bug?

rick reynolds December 09, 2016 02:53PM

Re: @SUMA_AlignToExperiment Bug?

philippn May 03, 2022 03:56PM

Re: @SUMA_AlignToExperiment Bug?

rick reynolds May 03, 2022 04:08PM

Re: @SUMA_AlignToExperiment Bug?

rick reynolds May 03, 2022 04:45PM

Re: @SUMA_AlignToExperiment Bug? Attachments

philippn May 10, 2022 05:31PM

Re: @SUMA_AlignToExperiment Bug?

ptaylor May 10, 2022 05:45PM

Re: @SUMA_AlignToExperiment Bug?

philippn May 10, 2022 06:54PM

Re: @SUMA_AlignToExperiment Bug?

philippn June 02, 2022 12:37PM

Re: @SUMA_AlignToExperiment Bug?

ptaylor June 02, 2022 12:45PM

Re: @SUMA_AlignToExperiment Bug?

ptaylor June 02, 2022 07:07PM