AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 14, 2017 03:01AM
Hi Rick,
Thanks a lot for your answers! The original EPI contains only a part of the brain because we wanted to increase the spatial resolution of our ROI in the process of collecting data.
But now I would like to know whether the -partial_* option is essential for alignment. Because the preprocess using uber_subject.py has already taken too much time and the alignment without the option -partial_* looks like good:

Thank you!



Edited 2 time(s). Last edit at 01/14/2017 04:16AM by ZhangYu.
Subject Author Posted

How to preprocess the funtional images of just a part of the brains?

Zhang Yu January 11, 2017 03:38PM

Re: How to preprocess the funtional images of just a part of the brains?

rick reynolds January 12, 2017 09:25AM

Re: How to preprocess the funtional images of just a part of the brains?

Zhang Yu January 14, 2017 03:01AM

Re: How to preprocess the funtional images of just a part of the brains?

rick reynolds January 17, 2017 10:36AM