AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Hyuntaek
October 11, 2017 12:36AM
Hello afni,

I have a question about the output file from the RetinoProc script file.

I am using the RetinoProc script file to create the somatotopic map and wondering whether or not there is a way to open the output file in the Matlab. In other words, can I open the xxx.sm.lh.pol.field.niml.dset file in the Matlab?

I've tried to use ConvertDset to convert the .niml.dset file to ASCII niml format and was able to read the ASCII file format in the Matlab. However, this converted file cannot be read in SUMA. Here is the code that I was using to convert the .niml.dset file to ASCII niml file.

ConvertDset -o_niml_asc -input phase.sm.lh.pol.field.niml.dset -prefix sample.sm.lh.pol.field.niml.dset

I would like to modify several phase information manually in Matlab. Or if I can read .niml.dset in afni, that could be another option for me.

Thank you,
Taek
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Subject Author Posted

reading niml.dset file

Hyuntaek October 11, 2017 12:36AM

Re: reading niml.dset file

Daniel Glen October 13, 2017 04:20PM