AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 11, 2017 03:38AM
Hi all,

I got a problem when I was running 3dTcorrMap for my Whole-Brain Voxel-Voxel
Correlation analysis, the program always kill itself without any reason like this:

3dTcorrMap -input y03.r01.bp+tlrc. -mask y03.r01.bp+tlrc. -polort -1 -CorrMap wb_map -CorrMask
++ 3dTcorrMap: AFNI version=AFNI_17.1.10 (Jun 6 2017) [64-bit]
++ Number of voxels in mask = 103704
++ Loading input dataset
++ CorrMap: this might take a long while and a lot of memory,
+ and will create big [436 billion [giga] bytes] output dataset ...
+ extracting mask-ed time series
+ normalizing extracted time series
++ Starting long long loop: OpenMP threads=8 10 trillion [tera] Flops
+ Single loop (1/50) duration: 25.4 secs = 0.42 mins
Remaining (49/50) time est.: 1244 secs = 20.7 mins = 0.35 hrs = 0.014 days
++ Voxel loop: 0123Killed

Does anyone has idea about this problem?THANKS!!!

Best regards,
Sue
Subject Author Posted

program killed running 3dTcorrMap

Sue_TS October 11, 2017 03:38AM

Re: program killed running 3dTcorrMap

rick reynolds October 11, 2017 08:30AM

Re: program killed running 3dTcorrMap

Sue_TS October 11, 2017 08:52AM

Re: program killed running 3dTcorrMap

rick reynolds October 11, 2017 08:58AM

Re: program killed running 3dTcorrMap

Sue_TS October 11, 2017 11:08AM

Re: program killed running 3dTcorrMap

rick reynolds October 18, 2017 08:34AM