AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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October 11, 2017 11:08AM
It seems to be the problem of the memory space because my %CPU is over 90% when running 3dTcorrMap :(.
It's really impossible for me to update my computer recently, so I guess I could import my data into the MATLAB to finish this analysis, but my code couldn't work.
Here's my core command in AFNI.MATLAB:
"[x_size,y_size,z_size,TR]=size(Vmask);
TcorrMap=zeros(x_size,y_size,z_size);
for x=1:x_size
for y=1:y_size
for z=1:z_size
voxel_time=squeeze(Vmask(x,y,z,:));
if unique(voxel_time)~=0
TcorrMap=corr(Vmask(x,y,z,:));
end
end
end
end"
Is there any problem in my way of using this "corr" function?

Best regards,
Sue
Subject Author Posted

program killed running 3dTcorrMap

Sue_TS October 11, 2017 03:38AM

Re: program killed running 3dTcorrMap

rick reynolds October 11, 2017 08:30AM

Re: program killed running 3dTcorrMap

Sue_TS October 11, 2017 08:52AM

Re: program killed running 3dTcorrMap

rick reynolds October 11, 2017 08:58AM

Re: program killed running 3dTcorrMap

Sue_TS October 11, 2017 11:08AM

Re: program killed running 3dTcorrMap

rick reynolds October 18, 2017 08:34AM