AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Colm Connolly
November 14, 2017 09:49AM
Are your time series in a row or column? If I recall 3dfim+ likes the ideal file in a column. To convert from row to column is trivial, just add a ' at the end of your ideal file name on the 3dfim+ command line. Though you will more than likely need to add a \ before the ' in order to prevent the shell from interpreting it.

You command will look something like:
3dfim+ -input input+tlrc.HEAD -ideal_file EO_alpha_ps_conv_HRF_ts_normalized.txt\' -out Correlation -bucket correlation
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3dfim+

hjr61547 November 14, 2017 02:47AM

Re: 3dfim+

Colm Connolly November 14, 2017 09:49AM