AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 14, 2018 08:18PM
Hi Pt
Year. I have run all the steps in the afni installation in WIN10. For the afni_system_check.py step, it did echo one error to fix; and I post this message in anoter topic.

I have tried some program for fun. I met one trouble until now: Open the AFNI, see TT_N27+tlrc, right click the image, select the "where am i". In principle, it should echo the coordinates, brain region name, broadman stuff..... However, my afni GUI QUIT after 2-4s... It makes me sad. I checked the command line to see whether it reported some errors. But nothing error I can see. Here is the command line report:
========
charujing@DESKTOP-DFPPAIU:~/abin$ afni
Precompiled binary linux_ubuntu_16_64: Jan 11 2018 (Version AFNI_18.0.03)

Thanks go to ZS Saad for useful feedback

Initializing: X11[Colin Harrison v 60900031].. Widgets...... Input files:
session # 1 = /home/charujing/abin/ ==> 82 datasets
dataset count = 82
Time series = 0 files read
NLfit & NLerr= Optimizer (AFNI_NLFIM_METHOD) is SIMPLEX
NLfit & NLerr= Found 29 models
++ AFNI is detached from terminal.
charujing@DESKTOP-DFPPAIU:~/abin$
Plugins = 52 libraries read

++ NOTE: This version of AFNI was built Jan 11 2018 ++
++ NOTE: 'Define Markers' is hidden: right-click 'DataDir' to see it
++ NOTE: Use '-seehidden' option to see which plugins are hidden


------------------------- AFNI Startup Tip (34/62)---------------------------
The Define Datamode control panel lets you control how the OLay dataset is
resampled to fit the ULay dataset (that defines the basis for the pixel grid
on which the images are displayed). The options are:
NN = Nearest Neighbor Li = Linear
Cu = Cubic Bk = Blocky (between NN and Li)
When the OverLay is at a coarser resolution than the UnderLay (common in FMRI),
Li will produce 'nicer' looking maps, but NN will be more 'honest' looking.
-----------------------------------------------------------------------------
reading MNIa_caez_pmaps_18+tlrc(328 million [mega] bytes).........done
========
Rujing
Subject Author Posted

windows10 ubuntu afni installation

charujing123 January 12, 2018 10:18PM

Re: windows10 ubuntu afni installation

ptaylor January 12, 2018 10:41PM

Re: windows10 ubuntu afni installation

charujing123 January 12, 2018 11:49PM

Re: windows10 ubuntu afni installation

ptaylor January 13, 2018 07:38AM

Re: windows10 ubuntu afni installation

charujing123 January 14, 2018 08:18PM