AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Daniel Glen
January 24, 2018 04:45PM
We now have a suite of scripts to compute thickness for a mask three ways. Each method works very differently from each other, but all compute thickness in the volume with an option to map to a surface. The methods take seconds or minutes to run in most cases. We have tried these with synthetic models and brains from humans, macaque and marmoset. See our OHBM abstract for some more description. The new scripts are called @measure_bb_thick, @measure_erosion_thick, @measure_in2out and @thickness_master.

https://afni.nimh.nih.gov/pub/sscc/staff/glend/OHBM_2018_AFNI_Thickness.pdf

To go along with that, we have a naming contest for the suite with these choices or suggest your own. Send your suggestions to glend @ mail.nih.gov.

Through thick or thin suite
In thickness or in health
Thick of it all
ATM (AFNI Thickness Measurements)
Thickly Thweet
…?

This software is still in alpha/beta release, and, as usual, you are all guinea pigs, I mean, software testers for life. Please provide comments and suggestions.



Edited 1 time(s). Last edit at 08/09/2018 05:03PM by Daniel Glen.
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Daniel Glen January 24, 2018 04:45PM