AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
June 06, 2018 04:45AM
Hi Rick,

Output of out.mrt.0001 is:

++ applying max_consec to: NMA, NMS, HMA, HMS, NULL
saving 3dD command to file 'cmd.3dd.0001.txt'...

ISI statistics (5 elements) :

total per run
------ ------------------------------
total time 2760.0 690.0 690.0 690.0 690.0
total time: stim 2480.0 620.0 620.0 620.0 620.0
total time: rest 280.0 70.0 70.0 70.0 70.0

rest: total isi 240.0 60.0 60.0 60.0 60.0
rest: pre stim 0.0 0.0 0.0 0.0 0.0
rest: post stim 40.0 10.0 10.0 10.0 10.0

num stimuli 216 54 54 54 54


min mean max stdev
------- ------- ------- -------
rest: pre-stim 0.000 0.000 0.000 0.000
rest: post-stim 9.990 9.998 10.000 0.005

rest: run #0 ISI 0.000 1.132 3.790 1.008
rest: run #1 ISI 0.000 1.132 3.790 1.008
rest: run #2 ISI 0.000 1.132 3.790 1.008
rest: run #3 ISI 0.000 1.132 3.770 0.981

all runs: ISI 0.000 1.132 3.790 0.994
all runs: stimuli 10.000 11.481 12.000 0.878


within-TR stimulus offset statistics :
per run
------------------------------
offset means 1.011 0.909 0.908 1.065
offset stdevs 0.666 0.557 0.575 0.621

overall: mean = 0.973 maxoff = 2.000 stdev = 0.6056
fractional: mean = 0.487 maxoff = 1.000 stdev = 0.3028

______________________________________________________________________________

output of out.3dD.0001 is:

cmd.3dd.0001: No such file or directory.

_______________________________________________________________________________

Thank you for your help!

Best,
Laura
Subject Author Posted

foreach error in @stim_analyze script

Laura Verga May 02, 2018 11:13AM

Re: foreach error in @stim_analyze script

rick reynolds May 02, 2018 05:31PM

Re: foreach error in @stim_analyze script Attachments

Laura Verga May 08, 2018 10:56AM

Re: foreach error in @stim_analyze script

rick reynolds May 14, 2018 10:12AM

Re: foreach error in @stim_analyze script

rick reynolds May 14, 2018 10:40AM

Re: foreach error in @stim_analyze script

Laura Verga June 04, 2018 08:39AM

Re: foreach error in @stim_analyze script

Laura Verga June 05, 2018 04:57AM

Re: foreach error in @stim_analyze script

rick reynolds June 05, 2018 04:34PM

Re: foreach error in @stim_analyze script

Laura Verga June 06, 2018 04:45AM

Re: foreach error in @stim_analyze script

rick reynolds June 08, 2018 09:12AM

Re: foreach error in @stim_analyze script

Laura Verga June 15, 2018 11:24AM