AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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s1110a
June 13, 2018 03:27PM
I rust ran into a problem that I have not encountered before. One subject has an image that is shifted up relative to the images from the other subjects. Something is not right with the superior-inferior dimension. I should mention that I don't have full brain coverage (near full brain coverage) and I had to specify "-deoblique on" in order to get the structural scans to line up with the functional scans (currently considering "-cmass cmass", "-big_move","-giant_move",
"-ginormous_move", and -align_centers yes" for the deviant subject). The deoblique option was used for all subjects. What might be going on with this subject?



Edited 1 time(s). Last edit at 06/13/2018 03:49PM by s1110a.
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Subject Author Posted

Image Shifted

s1110a June 13, 2018 03:27PM

Re: Image Shifted

Daniel Glen June 13, 2018 07:27PM

Re: Image Shifted

s1110a June 14, 2018 03:46PM