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aloijm
April 11, 2020 02:43PM
Greetings AFNI experts- I am having a bit of trouble running a 3dMVM script. When I run the following script: 

3dMVM -prefix Fdb_Novel_Chosen_ZNB_ZIT_all_mod -jobs 7	\
-bsVars 'ZNB+ZIT'					\
-wsVars 'Condition' \
-qVars 'ZNB,ZIT' \
-mask Mask_TT_caez_colin27_T1_18_resample+tlrc.BRIK	\
-dataTable @datatable.txt

I get the following output from 3dMVM: 

*+ WARNING: mri_fdrize: will not process only 0 values (min=20)
++ Smallest FDR q [0 (Intercept) F] = 0
*+ WARNING: mri_fdrize: will not process only 0 values (min=20)
++ Smallest FDR q [1 ZNB F] = 0
*+ WARNING: mri_fdrize: will not process only 0 values (min=20)
++ Smallest FDR q [2 ZIT F] = 0
*+ WARNING: mri_fdrize: will not process only 0 values (min=20)
++ Smallest FDR q [3 Condition F] = 0
*+ WARNING: mri_fdrize: will not process only 0 values (min=20)
++ Smallest FDR q [4 ZNB:Condition F] = 0
*+ WARNING: mri_fdrize: will not process only 0 values (min=20)
++ Smallest FDR q [5 ZIT:Condition F] = 0

Congratulations! You have got an output Fdb_Novel_Chosen_ZNB_ZIT_all_mod+tlrc.

Warning messages:
1: Missing values for following ID(s):
1021, 1070, 1084, 1085, 1093, 1099, 1101, 1104, 1109, 1110, 1111, 1113, 1119, 1120, 1121, 1122, 1123, 1124, 1125, 1127, 1128, 1131, 1133, 1134, 1135, 1139, 1142, 1147, 1148, 1149, 1151, 1152, 1154, 1157, 1162, 1164, 1165, 1166, 1167, 1168, 1169, 1170, 1171, 1175, 1176, 1177, 1178, 1179, 1180, 1181, 1183, 1185, 1186, 1187, 1188, 1191, 1196, 1197, 1198, 1200, 1204, 1205, 1208, 1209, 1210, 1211, 1214, 1216, 1217, 1226, 1227, 1229, 1235, 1236, 1237, 1238, 1239, 1241, 1244, 1245, 1249, 1251, 1254, 1258, 1259, 1264, 1269, 1270, 1272, 1274, 1276, 1278, 1279, 1280, 1282, 1283, 1285, 1287, 1288, 1289, 2023, 2024, 2046, 2112, 2130, 2140, 2150, 2165, 2174, 2178, 2181, 2184, 2185, 2191, 2192, 2194, 2196, 2197, 2200, 2201, 2206, 2208, 2209, 2213, 2217, 2218, 2219, 2226, 2230, 2236, 2237, 2242, 2243, 2247, 2251, 2252, 2255, 2265, 2267, 2271, 2274, 2276, 2278, 2279, 2281, 2284, 2286, 2290, 2292, 2298, 2304, 2305, 2306, 2309, 2310, 2311, 2313, 2320, 2321, 2323, 2324 [... truncated] 
2: In summary.Anova.mlm(object$Anova, multivariate = FALSE) :
  Singular error SSP matrix:
non-sphericity test and corrections not available

When I open the brick and head files created by 3dMVM in the AFNI viewer they appear to be empty- wondering if anybody has gotten this error before when using 3dMVM and what folks have done to fix it? Thanks for your help!
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Subject Author Posted

3dMVM *+ WARNING: mri_fdrize: will not process only 0 values (min=20)

aloijm April 11, 2020 02:43PM

Re: 3dMVM *+ WARNING: mri_fdrize: will not process only 0 values (min=20)

gang April 13, 2020 08:36AM

Re: 3dMVM *+ WARNING: mri_fdrize: will not process only 0 values (min=20)

aloijm April 14, 2020 10:27PM